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Magnesium in PDB 146d: Solution Structure of the Mithramycin Dimer-Dna Complex

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Solution Structure of the Mithramycin Dimer-Dna Complex (pdb code 146d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Solution Structure of the Mithramycin Dimer-Dna Complex, PDB code: 146d:

Magnesium binding site 1 out of 1 in 146d

Go back to Magnesium Binding Sites List in 146d
Magnesium binding site 1 out of 1 in the Solution Structure of the Mithramycin Dimer-Dna Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Solution Structure of the Mithramycin Dimer-Dna Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg13

b:0.3
occ:1.00
O9 B:CRH3 2.1 0.2 1.0
O9 A:CRH9 2.1 0.3 1.0
O1 A:CRH9 2.4 0.2 1.0
O1 B:CRH3 2.4 0.2 1.0
C9 B:CRH3 3.3 0.2 1.0
C9 A:CRH9 3.3 0.2 1.0
C1 A:CRH9 3.4 0.2 1.0
C1 B:CRH3 3.4 0.2 1.0
C13 A:CRH9 3.7 0.2 1.0
C13 B:CRH3 3.7 0.2 1.0
H1 A:DDA10 3.9 0.2 1.0
H1 B:DDA4 3.9 0.2 1.0
H1' B:DC10 3.9 0.2 1.0
H1' A:DC4 3.9 0.2 1.0
H22 B:DG9 4.1 0.3 1.0
H21 B:DG9 4.1 0.3 1.0
H22 A:DG3 4.1 0.3 1.0
H21 A:DG3 4.1 0.3 1.0
O8 B:CRH3 4.1 0.3 1.0
O8 A:CRH9 4.1 0.3 1.0
O2 B:DC10 4.1 0.3 1.0
O2 A:DC4 4.1 0.3 1.0
H4' B:DG11 4.2 0.2 1.0
H4' A:DG5 4.3 0.2 1.0
O4' A:DG5 4.3 0.2 1.0
O4' B:DG11 4.3 0.2 1.0
H2'' B:DC10 4.3 0.2 1.0
H2'' A:DC4 4.3 0.2 1.0
C12 B:CRH3 4.4 0.2 1.0
C12 A:CRH9 4.4 0.2 1.0
N2 B:DG9 4.4 0.3 1.0
N2 A:DG3 4.4 0.2 1.0
H22 B:DDA4 4.5 0.3 1.0
H22 A:DDA10 4.5 0.4 1.0
H5' A:DG5 4.6 0.2 1.0
H5' B:DG11 4.6 0.2 1.0
C2 B:CRH3 4.7 0.2 1.0
C2 A:CRH9 4.7 0.2 1.0
C8 B:CRH3 4.8 0.2 1.0
C8 A:CRH9 4.8 0.3 1.0
C1 A:DDA10 4.8 0.2 1.0
C1 B:DDA4 4.8 0.2 1.0
C4' A:DG5 4.8 0.2 1.0
C4' B:DG11 4.8 0.2 1.0
HO8 B:CRH3 4.8 0.3 1.0
HO8 A:CRH9 4.8 0.3 1.0
C1' B:DC10 4.9 0.2 1.0
C1' A:DC4 4.9 0.2 1.0
C2' B:DC10 4.9 0.2 1.0
C2' A:DC4 4.9 0.2 1.0
O1 A:DDA10 4.9 0.3 1.0
O1 B:DDA4 4.9 0.2 1.0
H21 A:CRH9 5.0 0.3 1.0
H2' A:DC4 5.0 0.2 1.0
H2' B:DC10 5.0 0.2 1.0
H21 B:CRH3 5.0 0.2 1.0

Reference:

M.Sastry, D.J.Patel. Solution Structure of the Mithramycin Dimer-Dna Complex. Biochemistry V. 32 6588 1993.
ISSN: ISSN 0006-2960
PubMed: 8329387
DOI: 10.1021/BI00077A012
Page generated: Mon Dec 14 03:24:52 2020

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