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Magnesium in PDB 1af6: Maltoporin Sucrose Complex

Protein crystallography data

The structure of Maltoporin Sucrose Complex, PDB code: 1af6 was solved by R.Dutzler, T.Schirmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.40
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 129.660, 211.510, 217.910, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 21.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Maltoporin Sucrose Complex (pdb code 1af6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Maltoporin Sucrose Complex, PDB code: 1af6:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 1af6

Go back to Magnesium Binding Sites List in 1af6
Magnesium binding site 1 out of 4 in the Maltoporin Sucrose Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Maltoporin Sucrose Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg424

b:93.5
occ:1.00
OD1 A:ASP338 2.8 41.5 1.0
CG A:ASP338 3.8 40.5 1.0
OD2 A:ASP338 4.1 42.8 1.0
O A:HOH520 4.3 51.5 1.0
CB A:PRO395 4.9 36.5 1.0

Magnesium binding site 2 out of 4 in 1af6

Go back to Magnesium Binding Sites List in 1af6
Magnesium binding site 2 out of 4 in the Maltoporin Sucrose Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Maltoporin Sucrose Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg425

b:56.8
occ:1.00
OD1 C:ASP78 2.6 37.5 1.0
OD1 A:ASP78 2.7 42.4 1.0
OD1 B:ASP78 2.7 38.6 1.0
CG C:ASP78 3.5 37.4 1.0
CG B:ASP78 3.6 34.6 1.0
CG A:ASP78 3.6 37.5 1.0
OD2 C:ASP78 3.7 73.6 1.0
OD2 B:ASP78 3.7 73.3 1.0
OD2 A:ASP78 3.8 73.1 1.0
CB C:ASP78 4.9 32.0 1.0
CB B:ASP78 4.9 32.5 1.0
CB A:ASP78 5.0 32.0 1.0

Magnesium binding site 3 out of 4 in 1af6

Go back to Magnesium Binding Sites List in 1af6
Magnesium binding site 3 out of 4 in the Maltoporin Sucrose Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Maltoporin Sucrose Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg424

b:97.2
occ:1.00
OD1 B:ASP338 2.9 46.2 1.0
CG B:ASP338 4.0 45.4 1.0
OD2 B:ASP338 4.4 43.8 1.0

Magnesium binding site 4 out of 4 in 1af6

Go back to Magnesium Binding Sites List in 1af6
Magnesium binding site 4 out of 4 in the Maltoporin Sucrose Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Maltoporin Sucrose Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg424

b:96.7
occ:1.00
OD1 C:ASP338 3.0 46.9 1.0
CG C:ASP338 3.9 43.0 1.0
OD2 C:ASP338 4.3 46.2 1.0
O C:HOH526 4.7 56.3 1.0
CB C:PRO395 4.9 36.9 1.0

Reference:

Y.F.Wang, R.Dutzler, P.J.Rizkallah, J.P.Rosenbusch, T.Schirmer. Channel Specificity: Structural Basis For Sugar Discrimination and Differential Flux Rates in Maltoporin. J.Mol.Biol. V. 272 56 1997.
ISSN: ISSN 0022-2836
PubMed: 9299337
DOI: 10.1006/JMBI.1997.1224
Page generated: Tue Aug 13 02:02:26 2024

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