Magnesium in PDB 1aij: Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Protein crystallography data
The structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State, PDB code: 1aij
was solved by
M.H.B.Stowell,
T.M.Mcphillips,
S.M.Soltis,
D.C.Rees,
E.Abresch,
G.Feher,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
30.00 /
2.20
|
Space group
|
P 43 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
140.080,
140.080,
271.630,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
21.6 /
27
|
Other elements in 1aij:
The structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
(pdb code 1aij). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the
Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State, PDB code: 1aij:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Magnesium binding site 1 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 1 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg282
b:22.2
occ:1.00
|
MG
|
L:BCL282
|
0.0
|
22.2
|
1.0
|
ND
|
L:BCL282
|
2.0
|
24.6
|
1.0
|
NC
|
L:BCL282
|
2.1
|
21.2
|
1.0
|
NA
|
L:BCL282
|
2.1
|
25.1
|
1.0
|
NB
|
L:BCL282
|
2.1
|
25.6
|
1.0
|
NE2
|
L:HIS173
|
2.2
|
20.1
|
1.0
|
CE1
|
L:HIS173
|
2.9
|
16.0
|
1.0
|
C4A
|
L:BCL282
|
3.0
|
24.6
|
1.0
|
C4D
|
L:BCL282
|
3.1
|
26.9
|
1.0
|
C1B
|
L:BCL282
|
3.1
|
24.0
|
1.0
|
C4C
|
L:BCL282
|
3.1
|
20.2
|
1.0
|
C1D
|
L:BCL282
|
3.1
|
24.6
|
1.0
|
C1C
|
L:BCL282
|
3.1
|
23.0
|
1.0
|
C4B
|
L:BCL282
|
3.1
|
30.1
|
1.0
|
C1A
|
L:BCL282
|
3.2
|
23.9
|
1.0
|
CHB
|
L:BCL282
|
3.4
|
22.3
|
1.0
|
CD2
|
L:HIS173
|
3.4
|
10.2
|
1.0
|
CHD
|
L:BCL282
|
3.4
|
21.0
|
1.0
|
OBB
|
M:BCL310
|
3.4
|
33.3
|
1.0
|
CHC
|
L:BCL282
|
3.4
|
29.2
|
1.0
|
CHA
|
L:BCL282
|
3.5
|
28.2
|
1.0
|
CAB
|
M:BCL310
|
3.6
|
28.1
|
1.0
|
CBB
|
M:BCL310
|
3.6
|
23.6
|
1.0
|
ND1
|
L:HIS173
|
4.2
|
8.4
|
1.0
|
C2D
|
L:BCL282
|
4.2
|
29.8
|
1.0
|
C2B
|
L:BCL282
|
4.3
|
27.5
|
1.0
|
C3D
|
L:BCL282
|
4.3
|
29.9
|
1.0
|
C3B
|
L:BCL282
|
4.3
|
22.1
|
1.0
|
C3A
|
L:BCL282
|
4.4
|
21.2
|
1.0
|
C3B
|
M:BCL310
|
4.4
|
23.8
|
1.0
|
CG
|
L:HIS173
|
4.4
|
13.4
|
1.0
|
C3C
|
L:BCL282
|
4.4
|
16.6
|
1.0
|
C2C
|
L:BCL282
|
4.4
|
16.2
|
1.0
|
C2A
|
L:BCL282
|
4.5
|
20.7
|
1.0
|
CD2
|
L:PHE167
|
4.8
|
20.6
|
1.0
|
CBD
|
L:BCL282
|
5.0
|
25.8
|
1.0
|
|
Magnesium binding site 2 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 2 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg283
b:13.7
occ:1.00
|
MG
|
L:BCL283
|
0.0
|
13.7
|
1.0
|
NC
|
L:BCL283
|
2.0
|
13.2
|
1.0
|
ND
|
L:BCL283
|
2.0
|
11.4
|
1.0
|
NA
|
L:BCL283
|
2.0
|
12.1
|
1.0
|
NB
|
L:BCL283
|
2.1
|
6.8
|
1.0
|
NE2
|
L:HIS153
|
2.3
|
24.9
|
1.0
|
C4A
|
L:BCL283
|
3.0
|
17.4
|
1.0
|
C1C
|
L:BCL283
|
3.0
|
13.7
|
1.0
|
C4D
|
L:BCL283
|
3.0
|
10.3
|
1.0
|
C4C
|
L:BCL283
|
3.0
|
18.2
|
1.0
|
C1B
|
L:BCL283
|
3.1
|
7.6
|
1.0
|
C4B
|
L:BCL283
|
3.1
|
12.2
|
1.0
|
C1D
|
L:BCL283
|
3.1
|
15.1
|
1.0
|
C1A
|
L:BCL283
|
3.1
|
17.9
|
1.0
|
CD2
|
L:HIS153
|
3.2
|
23.0
|
1.0
|
CE1
|
L:HIS153
|
3.3
|
22.0
|
1.0
|
CHB
|
L:BCL283
|
3.4
|
10.7
|
1.0
|
CHC
|
L:BCL283
|
3.4
|
8.3
|
1.0
|
CHD
|
L:BCL283
|
3.4
|
15.4
|
1.0
|
CHA
|
L:BCL283
|
3.4
|
14.4
|
1.0
|
CBB
|
L:BPH285
|
4.1
|
18.3
|
1.0
|
C2D
|
L:BCL283
|
4.3
|
13.9
|
1.0
|
C2B
|
L:BCL283
|
4.3
|
10.6
|
1.0
|
C3B
|
L:BCL283
|
4.3
|
13.8
|
1.0
|
C3D
|
L:BCL283
|
4.3
|
14.1
|
1.0
|
C2C
|
L:BCL283
|
4.4
|
21.8
|
1.0
|
C3C
|
L:BCL283
|
4.4
|
23.9
|
1.0
|
C3A
|
L:BCL283
|
4.4
|
19.9
|
1.0
|
ND1
|
L:HIS153
|
4.4
|
30.0
|
1.0
|
CG
|
L:HIS153
|
4.4
|
30.4
|
1.0
|
C2A
|
L:BCL283
|
4.4
|
17.9
|
1.0
|
CE2
|
M:TYR210
|
4.7
|
25.1
|
1.0
|
CBA
|
L:BCL283
|
4.8
|
25.9
|
1.0
|
CBD
|
L:BCL283
|
4.9
|
21.9
|
1.0
|
|
Magnesium binding site 3 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 3 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Mg309
b:21.9
occ:1.00
|
MG
|
M:BCL309
|
0.0
|
21.9
|
1.0
|
ND
|
M:BCL309
|
2.0
|
18.5
|
1.0
|
NC
|
M:BCL309
|
2.1
|
20.8
|
1.0
|
NB
|
M:BCL309
|
2.1
|
23.6
|
1.0
|
NA
|
M:BCL309
|
2.1
|
24.0
|
1.0
|
NE2
|
M:HIS182
|
2.3
|
20.4
|
1.0
|
C4D
|
M:BCL309
|
3.0
|
24.2
|
1.0
|
C4A
|
M:BCL309
|
3.0
|
25.9
|
1.0
|
C1C
|
M:BCL309
|
3.0
|
21.2
|
1.0
|
C1B
|
M:BCL309
|
3.1
|
21.8
|
1.0
|
C4C
|
M:BCL309
|
3.1
|
20.6
|
1.0
|
C1D
|
M:BCL309
|
3.1
|
20.6
|
1.0
|
C4B
|
M:BCL309
|
3.1
|
28.4
|
1.0
|
C1A
|
M:BCL309
|
3.1
|
23.3
|
1.0
|
CD2
|
M:HIS182
|
3.1
|
23.9
|
1.0
|
CE1
|
M:HIS182
|
3.3
|
20.9
|
1.0
|
CHB
|
M:BCL309
|
3.4
|
23.4
|
1.0
|
CHC
|
M:BCL309
|
3.4
|
22.6
|
1.0
|
CHD
|
M:BCL309
|
3.4
|
18.7
|
1.0
|
CHA
|
M:BCL309
|
3.4
|
23.8
|
1.0
|
C2D
|
M:BCL309
|
4.2
|
23.3
|
1.0
|
C2B
|
M:BCL309
|
4.3
|
23.7
|
1.0
|
C3D
|
M:BCL309
|
4.3
|
22.9
|
1.0
|
C3B
|
M:BCL309
|
4.3
|
24.7
|
1.0
|
CG
|
M:HIS182
|
4.3
|
18.9
|
1.0
|
C2C
|
M:BCL309
|
4.4
|
23.0
|
1.0
|
ND1
|
M:HIS182
|
4.4
|
18.1
|
1.0
|
C3A
|
M:BCL309
|
4.4
|
24.1
|
1.0
|
C3C
|
M:BCL309
|
4.4
|
21.3
|
1.0
|
C2A
|
M:BCL309
|
4.4
|
22.3
|
1.0
|
CBB
|
L:BPH284
|
4.5
|
11.7
|
1.0
|
CE2
|
L:PHE181
|
4.5
|
18.9
|
1.0
|
CBD
|
M:BCL309
|
4.9
|
23.0
|
1.0
|
|
Magnesium binding site 4 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 4 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Mg310
b:20.6
occ:1.00
|
MG
|
M:BCL310
|
0.0
|
20.6
|
1.0
|
ND
|
M:BCL310
|
2.0
|
17.4
|
1.0
|
NC
|
M:BCL310
|
2.1
|
24.1
|
1.0
|
NB
|
M:BCL310
|
2.1
|
20.2
|
1.0
|
NA
|
M:BCL310
|
2.1
|
21.0
|
1.0
|
NE2
|
M:HIS202
|
2.3
|
20.2
|
1.0
|
C4D
|
M:BCL310
|
3.0
|
24.4
|
1.0
|
C4A
|
M:BCL310
|
3.0
|
20.3
|
1.0
|
C1C
|
M:BCL310
|
3.1
|
19.9
|
1.0
|
C1B
|
M:BCL310
|
3.1
|
24.4
|
1.0
|
CE1
|
M:HIS202
|
3.1
|
20.7
|
1.0
|
C4C
|
M:BCL310
|
3.1
|
26.2
|
1.0
|
C1D
|
M:BCL310
|
3.1
|
21.6
|
1.0
|
C4B
|
M:BCL310
|
3.1
|
22.6
|
1.0
|
C1A
|
M:BCL310
|
3.1
|
22.1
|
1.0
|
CD2
|
M:HIS202
|
3.3
|
19.4
|
1.0
|
CHB
|
M:BCL310
|
3.4
|
24.8
|
1.0
|
CHC
|
M:BCL310
|
3.4
|
20.3
|
1.0
|
CHD
|
M:BCL310
|
3.4
|
22.6
|
1.0
|
CBB
|
L:BCL282
|
3.4
|
23.1
|
1.0
|
CHA
|
M:BCL310
|
3.5
|
24.7
|
1.0
|
CAB
|
L:BCL282
|
3.5
|
22.0
|
1.0
|
OBB
|
L:BCL282
|
3.6
|
28.2
|
1.0
|
C2D
|
M:BCL310
|
4.2
|
16.6
|
1.0
|
ND1
|
M:HIS202
|
4.3
|
17.2
|
1.0
|
C2B
|
M:BCL310
|
4.3
|
20.3
|
1.0
|
C3D
|
M:BCL310
|
4.3
|
21.7
|
1.0
|
C3B
|
M:BCL310
|
4.3
|
23.8
|
1.0
|
C3B
|
L:BCL282
|
4.3
|
22.1
|
1.0
|
C2C
|
M:BCL310
|
4.4
|
24.1
|
1.0
|
C3A
|
M:BCL310
|
4.4
|
18.3
|
1.0
|
C3C
|
M:BCL310
|
4.4
|
26.8
|
1.0
|
CG
|
M:HIS202
|
4.4
|
14.8
|
1.0
|
C2A
|
M:BCL310
|
4.4
|
21.1
|
1.0
|
CBD
|
M:BCL310
|
4.9
|
18.8
|
1.0
|
|
Magnesium binding site 5 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 5 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Mg282
b:30.0
occ:1.00
|
MG
|
R:BCL282
|
0.0
|
30.0
|
1.0
|
ND
|
R:BCL282
|
2.0
|
35.5
|
1.0
|
NC
|
R:BCL282
|
2.1
|
31.1
|
1.0
|
NB
|
R:BCL282
|
2.1
|
30.2
|
1.0
|
NA
|
R:BCL282
|
2.1
|
33.7
|
1.0
|
NE2
|
R:HIS173
|
2.2
|
30.2
|
1.0
|
CE1
|
R:HIS173
|
3.0
|
26.4
|
1.0
|
C4A
|
R:BCL282
|
3.0
|
29.4
|
1.0
|
C4D
|
R:BCL282
|
3.1
|
36.9
|
1.0
|
C1B
|
R:BCL282
|
3.1
|
27.0
|
1.0
|
C4C
|
R:BCL282
|
3.1
|
30.2
|
1.0
|
C1C
|
R:BCL282
|
3.1
|
30.0
|
1.0
|
C1D
|
R:BCL282
|
3.1
|
37.5
|
1.0
|
C4B
|
R:BCL282
|
3.1
|
30.1
|
1.0
|
C1A
|
R:BCL282
|
3.2
|
28.7
|
1.0
|
CD2
|
R:HIS173
|
3.3
|
26.5
|
1.0
|
CHB
|
R:BCL282
|
3.4
|
30.8
|
1.0
|
CBB
|
S:BCL310
|
3.4
|
21.6
|
1.0
|
CHC
|
R:BCL282
|
3.4
|
29.4
|
1.0
|
CHD
|
R:BCL282
|
3.4
|
33.1
|
1.0
|
CHA
|
R:BCL282
|
3.5
|
33.9
|
1.0
|
CAB
|
S:BCL310
|
3.5
|
30.5
|
1.0
|
OBB
|
S:BCL310
|
3.6
|
37.9
|
1.0
|
ND1
|
R:HIS173
|
4.2
|
25.3
|
1.0
|
C2D
|
R:BCL282
|
4.3
|
39.8
|
1.0
|
C2B
|
R:BCL282
|
4.3
|
26.4
|
1.0
|
C3D
|
R:BCL282
|
4.3
|
36.8
|
1.0
|
C3B
|
R:BCL282
|
4.3
|
26.4
|
1.0
|
C3B
|
S:BCL310
|
4.3
|
28.3
|
1.0
|
CG
|
R:HIS173
|
4.4
|
22.2
|
1.0
|
C3A
|
R:BCL282
|
4.4
|
30.7
|
1.0
|
C2C
|
R:BCL282
|
4.4
|
27.9
|
1.0
|
C3C
|
R:BCL282
|
4.4
|
30.6
|
1.0
|
C2A
|
R:BCL282
|
4.5
|
31.0
|
1.0
|
CD2
|
R:PHE167
|
4.8
|
30.8
|
1.0
|
CBD
|
R:BCL282
|
5.0
|
31.6
|
1.0
|
|
Magnesium binding site 6 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 6 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Mg283
b:21.9
occ:1.00
|
MG
|
R:BCL283
|
0.0
|
21.9
|
1.0
|
NC
|
R:BCL283
|
2.0
|
18.7
|
1.0
|
ND
|
R:BCL283
|
2.0
|
19.8
|
1.0
|
NA
|
R:BCL283
|
2.1
|
19.2
|
1.0
|
NB
|
R:BCL283
|
2.1
|
17.4
|
1.0
|
NE2
|
R:HIS153
|
2.3
|
24.0
|
1.0
|
C4A
|
R:BCL283
|
3.0
|
25.9
|
1.0
|
C4C
|
R:BCL283
|
3.0
|
17.8
|
1.0
|
C1C
|
R:BCL283
|
3.0
|
23.1
|
1.0
|
C4D
|
R:BCL283
|
3.1
|
22.0
|
1.0
|
C1B
|
R:BCL283
|
3.1
|
20.5
|
1.0
|
C1D
|
R:BCL283
|
3.1
|
18.1
|
1.0
|
C4B
|
R:BCL283
|
3.1
|
20.5
|
1.0
|
C1A
|
R:BCL283
|
3.1
|
25.0
|
1.0
|
CD2
|
R:HIS153
|
3.3
|
21.9
|
1.0
|
CE1
|
R:HIS153
|
3.3
|
29.4
|
1.0
|
CHB
|
R:BCL283
|
3.4
|
23.0
|
1.0
|
CHC
|
R:BCL283
|
3.4
|
21.6
|
1.0
|
CHD
|
R:BCL283
|
3.4
|
14.6
|
1.0
|
CHA
|
R:BCL283
|
3.5
|
26.7
|
1.0
|
C2D
|
R:BCL283
|
4.3
|
21.1
|
1.0
|
C2B
|
R:BCL283
|
4.3
|
20.0
|
1.0
|
C3D
|
R:BCL283
|
4.3
|
20.3
|
1.0
|
C3B
|
R:BCL283
|
4.3
|
19.8
|
1.0
|
OBB
|
R:BPH284
|
4.3
|
40.7
|
1.0
|
C2C
|
R:BCL283
|
4.4
|
24.4
|
1.0
|
C3C
|
R:BCL283
|
4.4
|
22.0
|
1.0
|
C3A
|
R:BCL283
|
4.4
|
24.9
|
1.0
|
ND1
|
R:HIS153
|
4.4
|
31.2
|
1.0
|
CG
|
R:HIS153
|
4.4
|
28.5
|
1.0
|
C2A
|
R:BCL283
|
4.4
|
20.5
|
1.0
|
CE2
|
S:TYR210
|
4.6
|
29.9
|
1.0
|
CBA
|
R:BCL283
|
4.9
|
29.8
|
1.0
|
CBC
|
R:BCL283
|
4.9
|
22.3
|
1.0
|
CBD
|
R:BCL283
|
5.0
|
27.3
|
1.0
|
|
Magnesium binding site 7 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 7 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg309
b:24.3
occ:1.00
|
MG
|
S:BCL309
|
0.0
|
24.3
|
1.0
|
ND
|
S:BCL309
|
2.0
|
21.5
|
1.0
|
NC
|
S:BCL309
|
2.1
|
20.6
|
1.0
|
NB
|
S:BCL309
|
2.1
|
22.2
|
1.0
|
NA
|
S:BCL309
|
2.1
|
26.6
|
1.0
|
NE2
|
S:HIS182
|
2.2
|
22.9
|
1.0
|
C4D
|
S:BCL309
|
3.0
|
26.1
|
1.0
|
C4A
|
S:BCL309
|
3.0
|
22.7
|
1.0
|
C1C
|
S:BCL309
|
3.1
|
20.7
|
1.0
|
C1B
|
S:BCL309
|
3.1
|
22.5
|
1.0
|
C4C
|
S:BCL309
|
3.1
|
20.6
|
1.0
|
C1D
|
S:BCL309
|
3.1
|
19.5
|
1.0
|
C4B
|
S:BCL309
|
3.1
|
27.1
|
1.0
|
C1A
|
S:BCL309
|
3.1
|
25.6
|
1.0
|
CD2
|
S:HIS182
|
3.2
|
18.1
|
1.0
|
CE1
|
S:HIS182
|
3.2
|
17.2
|
1.0
|
CHC
|
S:BCL309
|
3.4
|
24.2
|
1.0
|
CHB
|
S:BCL309
|
3.4
|
20.7
|
1.0
|
CHD
|
S:BCL309
|
3.4
|
16.1
|
1.0
|
CHA
|
S:BCL309
|
3.5
|
21.8
|
1.0
|
C2D
|
S:BCL309
|
4.2
|
19.9
|
1.0
|
C2B
|
S:BCL309
|
4.3
|
24.8
|
1.0
|
C3B
|
S:BCL309
|
4.3
|
26.0
|
1.0
|
C3D
|
S:BCL309
|
4.3
|
20.3
|
1.0
|
CG
|
S:HIS182
|
4.3
|
23.1
|
1.0
|
ND1
|
S:HIS182
|
4.4
|
16.4
|
1.0
|
CBB
|
S:BPH311
|
4.4
|
18.7
|
1.0
|
C2C
|
S:BCL309
|
4.4
|
24.1
|
1.0
|
C3C
|
S:BCL309
|
4.4
|
19.8
|
1.0
|
C3A
|
S:BCL309
|
4.4
|
26.1
|
1.0
|
C2A
|
S:BCL309
|
4.4
|
23.6
|
1.0
|
CE2
|
R:PHE181
|
4.8
|
23.8
|
1.0
|
CBD
|
S:BCL309
|
4.9
|
18.6
|
1.0
|
|
Magnesium binding site 8 out
of 8 in 1aij
Go back to
Magnesium Binding Sites List in 1aij
Magnesium binding site 8 out
of 8 in the Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Photosynthetic Reaction Center From Rhodobacter Sphaeroides in the Charge-Neutral Dqaqb State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg310
b:26.2
occ:1.00
|
MG
|
S:BCL310
|
0.0
|
26.2
|
1.0
|
ND
|
S:BCL310
|
2.0
|
29.5
|
1.0
|
NC
|
S:BCL310
|
2.1
|
28.8
|
1.0
|
NB
|
S:BCL310
|
2.1
|
27.4
|
1.0
|
NA
|
S:BCL310
|
2.1
|
25.4
|
1.0
|
NE2
|
S:HIS202
|
2.2
|
25.6
|
1.0
|
C4D
|
S:BCL310
|
3.0
|
29.3
|
1.0
|
C4A
|
S:BCL310
|
3.1
|
24.2
|
1.0
|
C1C
|
S:BCL310
|
3.1
|
33.5
|
1.0
|
C1B
|
S:BCL310
|
3.1
|
26.0
|
1.0
|
C4C
|
S:BCL310
|
3.1
|
24.7
|
1.0
|
C1D
|
S:BCL310
|
3.1
|
26.0
|
1.0
|
C4B
|
S:BCL310
|
3.1
|
30.4
|
1.0
|
CE1
|
S:HIS202
|
3.1
|
19.6
|
1.0
|
C1A
|
S:BCL310
|
3.1
|
25.1
|
1.0
|
CD2
|
S:HIS202
|
3.3
|
17.3
|
1.0
|
CHB
|
S:BCL310
|
3.4
|
25.5
|
1.0
|
CHC
|
S:BCL310
|
3.4
|
33.1
|
1.0
|
CHD
|
S:BCL310
|
3.4
|
22.0
|
1.0
|
CHA
|
S:BCL310
|
3.4
|
29.6
|
1.0
|
CBB
|
R:BCL282
|
3.5
|
20.5
|
1.0
|
CAB
|
R:BCL282
|
3.5
|
26.9
|
1.0
|
OBB
|
R:BCL282
|
3.5
|
23.9
|
1.0
|
C2D
|
S:BCL310
|
4.2
|
28.7
|
1.0
|
C2B
|
S:BCL310
|
4.3
|
23.3
|
1.0
|
ND1
|
S:HIS202
|
4.3
|
19.0
|
1.0
|
C3D
|
S:BCL310
|
4.3
|
28.4
|
1.0
|
C3B
|
R:BCL282
|
4.3
|
26.4
|
1.0
|
C3B
|
S:BCL310
|
4.3
|
28.3
|
1.0
|
CG
|
S:HIS202
|
4.4
|
14.8
|
1.0
|
C2C
|
S:BCL310
|
4.4
|
30.2
|
1.0
|
C3A
|
S:BCL310
|
4.4
|
28.6
|
1.0
|
C3C
|
S:BCL310
|
4.4
|
24.3
|
1.0
|
C2A
|
S:BCL310
|
4.4
|
25.6
|
1.0
|
CBD
|
S:BCL310
|
4.9
|
28.1
|
1.0
|
C2B
|
R:BCL282
|
5.0
|
26.4
|
1.0
|
|
Reference:
M.H.Stowell,
T.M.Mcphillips,
D.C.Rees,
S.M.Soltis,
E.Abresch,
G.Feher.
Light-Induced Structural Changes in Photosynthetic Reaction Center: Implications For Mechanism of Electron-Proton Transfer. Science V. 276 812 1997.
ISSN: ISSN 0036-8075
PubMed: 9115209
DOI: 10.1126/SCIENCE.276.5313.812
Page generated: Tue Aug 13 02:03:38 2024
|