Magnesium in PDB 1c51: Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only

The structure of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only, PDB code: 1c51 was solved by O.Klukas, W.D.Schubert, P.Jordan, N.Krauss, P.Fromme, H.T.Witt, W.Saenger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	60.00 / 4.00
Space group	P 63
Cell size a, b, c (Å), α, β, γ (°)	286.000, 286.000, 167.000, 90.00, 90.00, 120.00
R / Rfree (%)	n/a / n/a

The structure of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only also contains other interesting chemical elements:

Iron

(Fe)

12 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 72;

Binding sites:

The binding sites of Magnesium atom in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only (pdb code 1c51). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 72 binding sites of Magnesium where determined in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only, PDB code: 1c51:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg620 b:20.0 occ:1.00 MG B:CLA620 0.0 20.0 1.0 NC B:CLA620 1.9 20.0 1.0 NB B:CLA620 2.0 20.0 1.0 NA B:CLA620 2.0 20.0 1.0 ND B:CLA620 2.0 20.0 1.0 C1C B:CLA620 3.0 20.0 1.0 C4B B:CLA620 3.0 20.0 1.0 C1A B:CLA620 3.0 20.0 1.0 C4A B:CLA620 3.0 20.0 1.0 C1B B:CLA620 3.0 20.0 1.0 C4D B:CLA620 3.0 20.0 1.0 C4C B:CLA620 3.0 20.0 1.0 C1D B:CLA620 3.0 20.0 1.0 CHC B:CLA620 3.3 20.0 1.0 CHB B:CLA620 3.4 20.0 1.0 CHA B:CLA620 3.4 20.0 1.0 CHD B:CLA620 3.4 20.0 1.0 C2C B:CLA620 4.2 20.0 1.0 C2A B:CLA620 4.2 20.0 1.0 C3A B:CLA620 4.2 20.0 1.0 C3C B:CLA620 4.2 20.0 1.0 C3B B:CLA620 4.2 20.0 1.0 C2B B:CLA620 4.2 20.0 1.0 C3D B:CLA620 4.2 20.0 1.0 C2D B:CLA620 4.3 20.0 1.0 C3A A:CLA598 4.6 20.0 1.0 CHB A:CLA598 4.7 20.0 1.0 C4A A:CLA598 4.9 20.0 1.0

Magnesium binding site 2 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg598 b:20.0 occ:1.00 MG A:CLA598 0.0 20.0 1.0 NA A:CLA598 2.0 20.0 1.0 NC A:CLA598 2.0 20.0 1.0 NB A:CLA598 2.0 20.0 1.0 ND A:CLA598 2.0 20.0 1.0 C1A A:CLA598 3.0 20.0 1.0 C1C A:CLA598 3.0 20.0 1.0 C4A A:CLA598 3.0 20.0 1.0 C4B A:CLA598 3.0 20.0 1.0 C4D A:CLA598 3.0 20.0 1.0 C1B A:CLA598 3.0 20.0 1.0 C4C A:CLA598 3.0 20.0 1.0 C1D A:CLA598 3.1 20.0 1.0 CHA A:CLA598 3.4 20.0 1.0 CHC A:CLA598 3.4 20.0 1.0 CHB A:CLA598 3.4 20.0 1.0 CHD A:CLA598 3.5 20.0 1.0 C2A A:CLA598 4.2 20.0 1.0 C2C A:CLA598 4.2 20.0 1.0 C3A A:CLA598 4.2 20.0 1.0 C3C A:CLA598 4.3 20.0 1.0 C3B A:CLA598 4.3 20.0 1.0 C2B A:CLA598 4.3 20.0 1.0 C3D A:CLA598 4.3 20.0 1.0 C2D A:CLA598 4.3 20.0 1.0 CHB B:CLA620 4.8 20.0 1.0 C3A B:CLA620 4.9 20.0 1.0

Magnesium binding site 3 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg621 b:20.0 occ:1.00 MG B:CLA621 0.0 20.0 1.0 NA B:CLA621 1.9 20.0 1.0 NC B:CLA621 2.0 20.0 1.0 ND B:CLA621 2.0 20.0 1.0 NB B:CLA621 2.0 20.0 1.0 C4A B:CLA621 3.0 20.0 1.0 C1B B:CLA621 3.0 20.0 1.0 C1D B:CLA621 3.0 20.0 1.0 C4C B:CLA621 3.0 20.0 1.0 C1A B:CLA621 3.0 20.0 1.0 C4D B:CLA621 3.0 20.0 1.0 C1C B:CLA621 3.0 20.0 1.0 C4B B:CLA621 3.0 20.0 1.0 CHB B:CLA621 3.3 20.0 1.0 CHD B:CLA621 3.4 20.0 1.0 CHA B:CLA621 3.4 20.0 1.0 CHC B:CLA621 3.4 20.0 1.0 C2D B:CLA621 4.2 20.0 1.0 C2B B:CLA621 4.2 20.0 1.0 C3D B:CLA621 4.2 20.0 1.0 C3C B:CLA621 4.2 20.0 1.0 C3A B:CLA621 4.2 20.0 1.0 C2C B:CLA621 4.2 20.0 1.0 C2A B:CLA621 4.2 20.0 1.0 C3B B:CLA621 4.2 20.0 1.0

Magnesium binding site 4 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg622 b:20.0 occ:1.00 MG B:CLA622 0.0 20.0 1.0 NA B:CLA622 2.0 20.0 1.0 ND B:CLA622 2.0 20.0 1.0 NB B:CLA622 2.0 20.0 1.0 NC B:CLA622 2.0 20.0 1.0 C1A B:CLA622 3.0 20.0 1.0 C4D B:CLA622 3.0 20.0 1.0 C4A B:CLA622 3.0 20.0 1.0 C1B B:CLA622 3.0 20.0 1.0 C4B B:CLA622 3.0 20.0 1.0 C1D B:CLA622 3.0 20.0 1.0 C1C B:CLA622 3.0 20.0 1.0 C4C B:CLA622 3.0 20.0 1.0 CHA B:CLA622 3.4 20.0 1.0 CHB B:CLA622 3.4 20.0 1.0 CHC B:CLA622 3.4 20.0 1.0 CHD B:CLA622 3.4 20.0 1.0 C2A B:CLA622 4.2 20.0 1.0 C3A B:CLA622 4.3 20.0 1.0 C3D B:CLA622 4.3 20.0 1.0 C2B B:CLA622 4.3 20.0 1.0 C2D B:CLA622 4.3 20.0 1.0 C3B B:CLA622 4.3 20.0 1.0 C3C B:CLA622 4.3 20.0 1.0 C2C B:CLA622 4.3 20.0 1.0

Magnesium binding site 5 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg599 b:20.0 occ:1.00 MG A:CLA599 0.0 20.0 1.0 NB A:CLA599 2.0 20.0 1.0 NA A:CLA599 2.0 20.0 1.0 ND A:CLA599 2.0 20.0 1.0 NC A:CLA599 2.0 20.0 1.0 C1B A:CLA599 3.0 20.0 1.0 C4A A:CLA599 3.0 20.0 1.0 C1A A:CLA599 3.0 20.0 1.0 C1D A:CLA599 3.0 20.0 1.0 C4D A:CLA599 3.0 20.0 1.0 C4B A:CLA599 3.0 20.0 1.0 C1C A:CLA599 3.1 20.0 1.0 C4C A:CLA599 3.1 20.0 1.0 CHB A:CLA599 3.4 20.0 1.0 CHD A:CLA599 3.4 20.0 1.0 CHA A:CLA599 3.4 20.0 1.0 CHC A:CLA599 3.4 20.0 1.0 C2B A:CLA599 4.2 20.0 1.0 C3A A:CLA599 4.3 20.0 1.0 C3B A:CLA599 4.3 20.0 1.0 C2A A:CLA599 4.3 20.0 1.0 C3D A:CLA599 4.3 20.0 1.0 C2D A:CLA599 4.3 20.0 1.0 C2C A:CLA599 4.3 20.0 1.0 C3C A:CLA599 4.3 20.0 1.0

Magnesium binding site 6 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg600 b:20.0 occ:1.00 MG A:CLA600 0.0 20.0 1.0 NB A:CLA600 2.0 20.0 1.0 ND A:CLA600 2.0 20.0 1.0 NC A:CLA600 2.0 20.0 1.0 NA A:CLA600 2.0 20.0 1.0 C4B A:CLA600 3.0 20.0 1.0 C1B A:CLA600 3.0 20.0 1.0 C4D A:CLA600 3.0 20.0 1.0 C1C A:CLA600 3.0 20.0 1.0 C4A A:CLA600 3.0 20.0 1.0 C1A A:CLA600 3.1 20.0 1.0 C1D A:CLA600 3.1 20.0 1.0 C4C A:CLA600 3.1 20.0 1.0 CHC A:CLA600 3.4 20.0 1.0 CHB A:CLA600 3.4 20.0 1.0 CHA A:CLA600 3.4 20.0 1.0 CHD A:CLA600 3.5 20.0 1.0 C3B A:CLA600 4.3 20.0 1.0 C2B A:CLA600 4.3 20.0 1.0 C3D A:CLA600 4.3 20.0 1.0 C2D A:CLA600 4.3 20.0 1.0 C3A A:CLA600 4.3 20.0 1.0 C2C A:CLA600 4.3 20.0 1.0 C2A A:CLA600 4.3 20.0 1.0 C3C A:CLA600 4.3 20.0 1.0

Magnesium binding site 7 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg624 b:20.0 occ:1.00 MG B:CLA624 0.0 20.0 1.0 ND B:CLA624 2.0 20.0 1.0 NA B:CLA624 2.0 20.0 1.0 NC B:CLA624 2.0 20.0 1.0 NB B:CLA624 2.0 20.0 1.0 C4D B:CLA624 3.0 20.0 1.0 C1A B:CLA624 3.0 20.0 1.0 C1C B:CLA624 3.0 20.0 1.0 C4C B:CLA624 3.0 20.0 1.0 C1D B:CLA624 3.0 20.0 1.0 C4A B:CLA624 3.0 20.0 1.0 C4B B:CLA624 3.0 20.0 1.0 C1B B:CLA624 3.0 20.0 1.0 CHA B:CLA624 3.4 20.0 1.0 CHD B:CLA624 3.4 20.0 1.0 CHC B:CLA624 3.4 20.0 1.0 CHB B:CLA624 3.4 20.0 1.0 C3D B:CLA624 4.2 20.0 1.0 C3C B:CLA624 4.2 20.0 1.0 C2C B:CLA624 4.2 20.0 1.0 C2D B:CLA624 4.2 20.0 1.0 C2A B:CLA624 4.2 20.0 1.0 C3A B:CLA624 4.3 20.0 1.0 C3B B:CLA624 4.3 20.0 1.0 C2B B:CLA624 4.3 20.0 1.0

Magnesium binding site 8 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg625 b:20.0 occ:1.00 MG B:CLA625 0.0 20.0 1.0 ND B:CLA625 2.0 20.0 1.0 NB B:CLA625 2.0 20.0 1.0 NA B:CLA625 2.0 20.0 1.0 NC B:CLA625 2.0 20.0 1.0 C4D B:CLA625 3.0 20.0 1.0 C4B B:CLA625 3.0 20.0 1.0 C1A B:CLA625 3.0 20.0 1.0 C1B B:CLA625 3.0 20.0 1.0 C1C B:CLA625 3.0 20.0 1.0 C1D B:CLA625 3.0 20.0 1.0 C4A B:CLA625 3.0 20.0 1.0 C4C B:CLA625 3.0 20.0 1.0 CHA B:CLA625 3.4 20.0 1.0 CHC B:CLA625 3.4 20.0 1.0 CHB B:CLA625 3.4 20.0 1.0 CHD B:CLA625 3.4 20.0 1.0 C3D B:CLA625 4.2 20.0 1.0 C2A B:CLA625 4.2 20.0 1.0 C3B B:CLA625 4.2 20.0 1.0 C2D B:CLA625 4.3 20.0 1.0 C3A B:CLA625 4.3 20.0 1.0 C2B B:CLA625 4.3 20.0 1.0 C2C B:CLA625 4.3 20.0 1.0 C3C B:CLA625 4.3 20.0 1.0 CA B:UNK301 4.9 20.0 1.0

Magnesium binding site 9 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg603 b:20.0 occ:1.00 MG A:CLA603 0.0 20.0 1.0 NB A:CLA603 2.0 20.0 1.0 ND A:CLA603 2.0 20.0 1.0 NA A:CLA603 2.0 20.0 1.0 NC A:CLA603 2.0 20.0 1.0 C1B A:CLA603 3.0 20.0 1.0 C4D A:CLA603 3.0 20.0 1.0 C4B A:CLA603 3.0 20.0 1.0 C1D A:CLA603 3.0 20.0 1.0 C4A A:CLA603 3.0 20.0 1.0 C4C A:CLA603 3.0 20.0 1.0 C1C A:CLA603 3.0 20.0 1.0 C1A A:CLA603 3.0 20.0 1.0 CHA A:CLA603 3.4 20.0 1.0 CHB A:CLA603 3.4 20.0 1.0 CHD A:CLA603 3.4 20.0 1.0 CHC A:CLA603 3.4 20.0 1.0 C2B A:CLA603 4.2 20.0 1.0 C3B A:CLA603 4.2 20.0 1.0 C3C A:CLA603 4.2 20.0 1.0 C2C A:CLA603 4.2 20.0 1.0 C2D A:CLA603 4.2 20.0 1.0 C3D A:CLA603 4.2 20.0 1.0 C3A A:CLA603 4.3 20.0 1.0 C2A A:CLA603 4.3 20.0 1.0

Magnesium binding site 10 out of 72 in the Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Photosynthetic Reaction Center and Core Antenna System (Trimeric), Alpha Carbon Only within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg626 b:20.0 occ:1.00 MG B:CLA626 0.0 20.0 1.0 NA B:CLA626 2.0 20.0 1.0 ND B:CLA626 2.0 20.0 1.0 NB B:CLA626 2.0 20.0 1.0 NC B:CLA626 2.0 20.0 1.0 C4A B:CLA626 3.0 20.0 1.0 C1B B:CLA626 3.0 20.0 1.0 C4C B:CLA626 3.0 20.0 1.0 C1D B:CLA626 3.0 20.0 1.0 C1A B:CLA626 3.0 20.0 1.0 C4D B:CLA626 3.0 20.0 1.0 C4B B:CLA626 3.0 20.0 1.0 C1C B:CLA626 3.0 20.0 1.0 CHB B:CLA626 3.4 20.0 1.0 CHD B:CLA626 3.4 20.0 1.0 CHA B:CLA626 3.4 20.0 1.0 CHC B:CLA626 3.4 20.0 1.0 C3C B:CLA626 4.2 20.0 1.0 C2B B:CLA626 4.2 20.0 1.0 C2A B:CLA626 4.2 20.0 1.0 C3A B:CLA626 4.2 20.0 1.0 C2D B:CLA626 4.2 20.0 1.0 C3B B:CLA626 4.2 20.0 1.0 C2C B:CLA626 4.2 20.0 1.0 C3D B:CLA626 4.2 20.0 1.0 CA B:UNK68 4.3 20.0 1.0

O.Klukas, W.D.Schubert, P.Jordan, N.Krauss, P.Fromme, H.T.Witt, W.Saenger. Photosystem I, An Improved Model of the Stromal Subunits Psac, Psad, and Psae. J.Biol.Chem. V. 274 7351 1999.
ISSN: ISSN 0021-9258
PubMed: 10066799
DOI: 10.1074/JBC.274.11.7351