Magnesium in PDB 1cp8: uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9

The binding sites of Magnesium atom in the uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9 (pdb code 1cp8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9, PDB code: 1cp8:

Magnesium binding site 1 out of 1 in the uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg14 b:0.0 occ:1.00 O9 A:DXA14 2.4 0.0 1.0 O9 B:DXA15 2.4 0.0 1.0 O1 B:DXA15 2.5 0.0 1.0 O1 A:DXA14 2.7 0.0 1.0 HO8 A:DXA14 3.1 0.0 1.0 HO8 B:DXA15 3.3 0.0 1.0 O2 B:DC5 3.4 0.0 1.0 C9 B:DXA15 3.5 0.0 1.0 C9 A:DXA14 3.5 0.0 1.0 O2 A:DC5 3.5 0.0 1.0 C1 B:DXA15 3.6 0.0 1.0 H1' B:DC5 3.6 20.0 1.0 O4' B:DC6 3.7 0.0 1.0 C1 A:DXA14 3.7 0.0 1.0 H1' A:DC5 3.8 20.0 1.0 H22 A:DG4 3.9 0.0 1.0 O8 A:DXA14 4.0 0.0 1.0 C9A B:DXA15 4.0 0.0 1.0 H22 B:DG4 4.0 0.0 1.0 O4' A:DC6 4.1 0.0 1.0 O8 B:DXA15 4.1 0.0 1.0 C9A A:DXA14 4.1 0.0 1.0 H21 A:DG4 4.2 0.0 1.0 H2'' B:DC5 4.2 20.0 1.0 H1' B:DC6 4.2 20.0 1.0 H21 B:DG4 4.3 0.0 1.0 H5' B:DC6 4.4 20.0 1.0 H4' B:DC6 4.4 20.0 1.0 H2'' A:DC5 4.5 20.0 1.0 N2 A:DG4 4.5 0.0 1.0 H22 B:DDA9 4.5 0.2 1.0 C2 B:DC5 4.5 0.0 1.0 C1' B:DC6 4.5 0.0 1.0 N2 B:DG4 4.6 0.0 1.0 H1' A:DC6 4.6 20.0 1.0 C4' B:DC6 4.6 0.0 1.0 C1' B:DC5 4.6 0.0 1.0 C8A A:DXA14 4.6 0.0 1.0 H5' A:DC6 4.7 20.0 1.0 C2 A:DC5 4.7 0.0 1.0 C8A B:DXA15 4.7 0.0 1.0 H22 A:DDA9 4.7 0.2 1.0 H4' A:DC6 4.7 20.0 1.0 C1' A:DC5 4.8 0.0 1.0 C8 A:DXA14 4.8 0.0 1.0 C1' A:DC6 4.9 0.0 1.0 C2 B:DXA15 4.9 0.0 1.0 C8 B:DXA15 4.9 0.0 1.0 C4' A:DC6 4.9 0.0 1.0 C2' B:DC5 4.9 0.0 1.0

R.Katahira, M.Katahira, Y.Yamashita, H.Ogawa, Y.Kyogoku, M.Yoshida. Solution Structure of the Novel Antitumor Drug UCH9 Complexed with D(Ttggccaa)2 As Determined By uc(Nmr). Nucleic Acids Res. V. 26 744 1998.
ISSN: ISSN 0305-1048
PubMed: 9443966
DOI: 10.1093/NAR/26.3.744