Atomistry » Magnesium » PDB 1c5u-1cxz » 1cp8
Atomistry »
  Magnesium »
    PDB 1c5u-1cxz »
      1cp8 »

Magnesium in PDB 1cp8: uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9 (pdb code 1cp8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9, PDB code: 1cp8:

Magnesium binding site 1 out of 1 in 1cp8

Go back to Magnesium Binding Sites List in 1cp8
Magnesium binding site 1 out of 1 in the uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of uc(Nmr) Structure of Dna (5'-D(Ttggccaa)2-3') Complexed with Novel Antitumor Drug UCH9 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg14

b:0.0
occ:1.00
O9 A:DXA14 2.4 0.0 1.0
O9 B:DXA15 2.4 0.0 1.0
O1 B:DXA15 2.5 0.0 1.0
O1 A:DXA14 2.7 0.0 1.0
HO8 A:DXA14 3.1 0.0 1.0
HO8 B:DXA15 3.3 0.0 1.0
O2 B:DC5 3.4 0.0 1.0
C9 B:DXA15 3.5 0.0 1.0
C9 A:DXA14 3.5 0.0 1.0
O2 A:DC5 3.5 0.0 1.0
C1 B:DXA15 3.6 0.0 1.0
H1' B:DC5 3.6 20.0 1.0
O4' B:DC6 3.7 0.0 1.0
C1 A:DXA14 3.7 0.0 1.0
H1' A:DC5 3.8 20.0 1.0
H22 A:DG4 3.9 0.0 1.0
O8 A:DXA14 4.0 0.0 1.0
C9A B:DXA15 4.0 0.0 1.0
H22 B:DG4 4.0 0.0 1.0
O4' A:DC6 4.1 0.0 1.0
O8 B:DXA15 4.1 0.0 1.0
C9A A:DXA14 4.1 0.0 1.0
H21 A:DG4 4.2 0.0 1.0
H2'' B:DC5 4.2 20.0 1.0
H1' B:DC6 4.2 20.0 1.0
H21 B:DG4 4.3 0.0 1.0
H5' B:DC6 4.4 20.0 1.0
H4' B:DC6 4.4 20.0 1.0
H2'' A:DC5 4.5 20.0 1.0
N2 A:DG4 4.5 0.0 1.0
H22 B:DDA9 4.5 0.2 1.0
C2 B:DC5 4.5 0.0 1.0
C1' B:DC6 4.5 0.0 1.0
N2 B:DG4 4.6 0.0 1.0
H1' A:DC6 4.6 20.0 1.0
C4' B:DC6 4.6 0.0 1.0
C1' B:DC5 4.6 0.0 1.0
C8A A:DXA14 4.6 0.0 1.0
H5' A:DC6 4.7 20.0 1.0
C2 A:DC5 4.7 0.0 1.0
C8A B:DXA15 4.7 0.0 1.0
H22 A:DDA9 4.7 0.2 1.0
H4' A:DC6 4.7 20.0 1.0
C1' A:DC5 4.8 0.0 1.0
C8 A:DXA14 4.8 0.0 1.0
C1' A:DC6 4.9 0.0 1.0
C2 B:DXA15 4.9 0.0 1.0
C8 B:DXA15 4.9 0.0 1.0
C4' A:DC6 4.9 0.0 1.0
C2' B:DC5 4.9 0.0 1.0

Reference:

R.Katahira, M.Katahira, Y.Yamashita, H.Ogawa, Y.Kyogoku, M.Yoshida. Solution Structure of the Novel Antitumor Drug UCH9 Complexed with D(Ttggccaa)2 As Determined By uc(Nmr). Nucleic Acids Res. V. 26 744 1998.
ISSN: ISSN 0305-1048
PubMed: 9443966
DOI: 10.1093/NAR/26.3.744
Page generated: Tue Aug 13 02:30:15 2024

Last articles

Mg in 8GHU
Mg in 8G7N
Mg in 8GIY
Mg in 8GHF
Mg in 8GIP
Mg in 8GIM
Mg in 8GIN
Mg in 8GFT
Mg in 8GI6
Mg in 8GCQ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy