Atomistry » Magnesium » PDB 1cyq-1dak » 1d83
Atomistry »
  Magnesium »
    PDB 1cyq-1dak »
      1d83 »

Magnesium in PDB 1d83: Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution (pdb code 1d83). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution, PDB code: 1d83:

Magnesium binding site 1 out of 1 in 1d83

Go back to Magnesium Binding Sites List in 1d83
Magnesium binding site 1 out of 1 in the Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1

b:0.0
occ:1.00
O1 B:CPH23 1.9 0.0 1.0
O1 A:CPH33 1.9 0.0 1.0
O9 B:CPH23 2.0 0.0 1.0
O9 A:CPH33 2.1 0.0 1.0
C1 B:CPH23 2.9 0.0 1.0
C1 A:CPH33 2.9 0.0 1.0
C9 B:CPH23 3.1 0.0 1.0
H21 A:DG4 3.2 0.0 1.0
H21 B:DG14 3.2 0.0 1.0
H1' B:DC15 3.2 0.0 1.0
C9 A:CPH33 3.2 0.0 1.0
H1' A:DC5 3.3 0.0 1.0
H22 B:DG14 3.3 0.0 1.0
H22 A:DG4 3.4 0.0 1.0
C9A B:CPH23 3.4 0.0 1.0
C9A A:CPH33 3.5 0.0 1.0
N2 B:DG14 3.5 0.0 1.0
H1 B:CDR34 3.6 0.0 1.0
N2 A:DG4 3.6 0.0 1.0
H1 A:CDR24 3.7 0.0 1.0
H2'' B:DC15 3.7 0.0 1.0
H2'' A:DC5 3.8 0.0 1.0
O2 B:DC15 4.1 0.0 1.0
C2 B:CPH23 4.1 0.0 1.0
C2 A:CPH33 4.1 0.0 1.0
O2 A:DC5 4.2 0.0 1.0
C1' B:DC15 4.2 0.0 1.0
O8 B:CPH23 4.2 0.0 1.0
H2 A:CPH33 4.3 0.0 1.0
H2 B:CPH23 4.3 0.0 1.0
HO8 B:CPH23 4.3 0.0 1.0
C1' A:DC5 4.4 0.0 1.0
O8 A:CPH33 4.4 0.0 1.0
C8A B:CPH23 4.4 0.0 1.0
HO8 A:CPH33 4.4 0.0 1.0
C1 B:CDR34 4.5 0.0 1.0
C2' B:DC15 4.5 0.0 1.0
C8A A:CPH33 4.5 0.0 1.0
OGL B:CDR34 4.6 0.0 1.0
C1 A:CDR24 4.6 0.0 1.0
OGL A:CDR24 4.6 0.0 1.0
H22 B:CDR34 4.7 0.2 1.0
C2' A:DC5 4.7 0.0 1.0
H22 A:CDR24 4.7 0.2 1.0
C4A B:CPH23 4.8 0.0 1.0
C2 B:DG14 4.8 0.0 1.0
C2 B:DC15 4.8 0.0 1.0
C2 A:DG4 4.8 0.0 1.0
C4A A:CPH33 4.8 0.0 1.0
H2' B:DC15 4.9 0.0 1.0
O4' B:DC16 4.9 0.0 1.0
C2 A:DC5 4.9 0.0 1.0
C8 B:CPH23 4.9 0.0 1.0
O4' A:DC6 5.0 0.0 1.0
O4' B:DC15 5.0 0.0 1.0
H2' A:DC5 5.0 0.0 1.0

Reference:

X.L.Gao, P.Mirau, D.J.Patel. Structure Refinement of the Chromomycin Dimer-Dna Oligomer Complex in Solution. J.Mol.Biol. V. 223 259 1992.
ISSN: ISSN 0022-2836
PubMed: 1731073
DOI: 10.1016/0022-2836(92)90730-8
Page generated: Tue Aug 13 02:36:31 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy