Atomistry » Magnesium » PDB 1cyq-1dak » 1d83
Atomistry »
  Magnesium »
    PDB 1cyq-1dak »
      1d83 »

Magnesium in PDB 1d83: Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution (pdb code 1d83). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution, PDB code: 1d83:

Magnesium binding site 1 out of 1 in 1d83

Go back to Magnesium Binding Sites List in 1d83
Magnesium binding site 1 out of 1 in the Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure Refinement of the Chromomycin Dimer/Dna Oligomer Complex in Solution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1

b:0.0
occ:1.00
O1 B:CPH23 1.9 0.0 1.0
O1 A:CPH33 1.9 0.0 1.0
O9 B:CPH23 2.0 0.0 1.0
O9 A:CPH33 2.1 0.0 1.0
C1 B:CPH23 2.9 0.0 1.0
C1 A:CPH33 2.9 0.0 1.0
C9 B:CPH23 3.1 0.0 1.0
H21 A:DG4 3.2 0.0 1.0
H21 B:DG14 3.2 0.0 1.0
H1' B:DC15 3.2 0.0 1.0
C9 A:CPH33 3.2 0.0 1.0
H1' A:DC5 3.3 0.0 1.0
H22 B:DG14 3.3 0.0 1.0
H22 A:DG4 3.4 0.0 1.0
C9A B:CPH23 3.4 0.0 1.0
C9A A:CPH33 3.5 0.0 1.0
N2 B:DG14 3.5 0.0 1.0
H1 B:CDR34 3.6 0.0 1.0
N2 A:DG4 3.6 0.0 1.0
H1 A:CDR24 3.7 0.0 1.0
H2'' B:DC15 3.7 0.0 1.0
H2'' A:DC5 3.8 0.0 1.0
O2 B:DC15 4.1 0.0 1.0
C2 B:CPH23 4.1 0.0 1.0
C2 A:CPH33 4.1 0.0 1.0
O2 A:DC5 4.2 0.0 1.0
C1' B:DC15 4.2 0.0 1.0
O8 B:CPH23 4.2 0.0 1.0
H2 A:CPH33 4.3 0.0 1.0
H2 B:CPH23 4.3 0.0 1.0
HO8 B:CPH23 4.3 0.0 1.0
C1' A:DC5 4.4 0.0 1.0
O8 A:CPH33 4.4 0.0 1.0
C8A B:CPH23 4.4 0.0 1.0
HO8 A:CPH33 4.4 0.0 1.0
C1 B:CDR34 4.5 0.0 1.0
C2' B:DC15 4.5 0.0 1.0
C8A A:CPH33 4.5 0.0 1.0
OGL B:CDR34 4.6 0.0 1.0
C1 A:CDR24 4.6 0.0 1.0
OGL A:CDR24 4.6 0.0 1.0
H22 B:CDR34 4.7 0.2 1.0
C2' A:DC5 4.7 0.0 1.0
H22 A:CDR24 4.7 0.2 1.0
C4A B:CPH23 4.8 0.0 1.0
C2 B:DG14 4.8 0.0 1.0
C2 B:DC15 4.8 0.0 1.0
C2 A:DG4 4.8 0.0 1.0
C4A A:CPH33 4.8 0.0 1.0
H2' B:DC15 4.9 0.0 1.0
O4' B:DC16 4.9 0.0 1.0
C2 A:DC5 4.9 0.0 1.0
C8 B:CPH23 4.9 0.0 1.0
O4' A:DC6 5.0 0.0 1.0
O4' B:DC15 5.0 0.0 1.0
H2' A:DC5 5.0 0.0 1.0

Reference:

X.L.Gao, P.Mirau, D.J.Patel. Structure Refinement of the Chromomycin Dimer-Dna Oligomer Complex in Solution. J.Mol.Biol. V. 223 259 1992.
ISSN: ISSN 0022-2836
PubMed: 1731073
DOI: 10.1016/0022-2836(92)90730-8
Page generated: Tue Aug 13 02:36:31 2024

Last articles

Cl in 2Y5T
Cl in 2Y5H
Cl in 2Y5F
Cl in 2Y5G
Cl in 2Y56
Cl in 2Y58
Cl in 2Y54
Cl in 2Y57
Cl in 2Y4G
Cl in 2Y4R
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy