Magnesium »
PDB 1cyq-1dak »
1d9d »
Magnesium in PDB 1d9d: Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3'
Enzymatic activity of Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3'
All present enzymatic activity of Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3':
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3', PDB code: 1d9d
was solved by
M.Teplova,
S.T.Wallace,
V.Tereshko,
G.Minasov,
A.M.Simons,
P.D.Cook,
M.Manoharan,
M.Egli,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 20.00 / 2.18 |
| Space group | P 43 |
| Cell size a, b, c (Å), α, β, γ (°) | 102.550, 102.550, 86.280, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 21.5 / 23.8 |
Other elements in 1d9d:
The structure of Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3' also contains other interesting chemical elements:
| Zinc | (Zn) | 4 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3'
(pdb code 1d9d). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3', PDB code: 1d9d:
In total only one binding site of Magnesium was determined in the Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3', PDB code: 1d9d:
Magnesium binding site 1 out of 1 in 1d9d
Go back to
Magnesium Binding Sites List in 1d9d
Magnesium binding site 1 out
of 1 in the Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3'
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Crystall Structure of the Complex of Dna Polymerase I Klenow Fragment with Short Dna Fragment Carrying 2'-0- Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3' within 5.0Å range:
|
Reference:
M.Teplova,
S.T.Wallace,
V.Tereshko,
G.Minasov,
A.M.Symons,
P.D.Cook,
M.Manoharan,
M.Egli.
Structural Origins of the Exonuclease Resistance of A Zwitterionic Rna. Proc.Natl.Acad.Sci.Usa V. 96 14240 1999.
ISSN: ISSN 0027-8424
PubMed: 10588690
DOI: 10.1073/PNAS.96.25.14240
Page generated: Mon Dec 14 05:50:10 2020
ISSN: ISSN 0027-8424
PubMed: 10588690
DOI: 10.1073/PNAS.96.25.14240
Last articles
Zn in 8WB0Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
