Magnesium in PDB 1dj6: Complex of A Z-Dna Hexamer, D(Cg)3, with Synthetic Polyamine at Room Temperature

The structure of Complex of A Z-Dna Hexamer, D(Cg)3, with Synthetic Polyamine at Room Temperature, PDB code: 1dj6 was solved by H.Ohishi, K.-I.Tomita, I.Nakanishi, M.Ohtsuchi, T.Hakoshima, A.Rich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 1.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	17.930, 31.360, 44.620, 90.00, 90.00, 90.00
R / Rfree (%)	16.5 / 16.9

The binding sites of Magnesium atom in the Complex of A Z-Dna Hexamer, D(Cg)3, with Synthetic Polyamine at Room Temperature (pdb code 1dj6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Complex of A Z-Dna Hexamer, D(Cg)3, with Synthetic Polyamine at Room Temperature, PDB code: 1dj6:

Magnesium binding site 1 out of 1 in the Complex of A Z-Dna Hexamer, D(Cg)3, with Synthetic Polyamine at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Complex of A Z-Dna Hexamer, D(Cg)3, with Synthetic Polyamine at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg104 b:55.2 occ:1.00 O A:HOH82 2.6 46.8 1.0 O A:HOH92 3.4 27.5 1.0 O A:HOH56 3.6 9.5 1.0 O A:HOH43 4.3 7.4 1.0 O A:HOH83 4.6 51.0 1.0

H.Ohishi, K.Suzuki, M.Ohtsuchi, T.Hakoshima, A.Rich. The Crystal Structure of N1-[2-(2-Amino-Ethylamino)-Ethyl]-Ethane-1,2-Diamine (Polyamines) Binding to the Minor Groove of D(Cgcgcg)2, Hexamer at Room Temperature Febs Lett. V. 523 29 2002.
ISSN: ISSN 0014-5793
PubMed: 12123799
DOI: 10.1016/S0014-5793(02)02922-8