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Magnesium in PDB 1do0: Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli

Protein crystallography data

The structure of Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli, PDB code: 1do0 was solved by M.Bochtler, C.Hartmann, H.K.Song, G.P.Bourenkov, H.D.Bartunik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 3.00
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 208.150, 167.700, 108.190, 90.00, 90.00, 90.00
R / Rfree (%) 29.4 / 34.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli (pdb code 1do0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli, PDB code: 1do0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 1do0

Go back to Magnesium Binding Sites List in 1do0
Magnesium binding site 1 out of 2 in the Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg600

b:39.9
occ:1.00
O1G B:ATP905 2.8 98.2 1.0
CE B:LYS63 3.3 43.5 1.0
OD1 B:ASP256 3.3 30.8 1.0
NZ B:LYS63 3.6 50.1 1.0
OG B:SER307 3.7 42.0 1.0
PG B:ATP905 3.8 0.8 1.0
O2G B:ATP905 3.9 0.4 1.0
CA B:GLY308 4.0 28.9 1.0
N B:ALA309 4.1 38.9 1.0
OE1 B:GLU257 4.1 49.6 1.0
C B:GLY308 4.1 35.2 1.0
N B:GLY308 4.2 28.9 1.0
CG B:ASP256 4.3 41.5 1.0
OD2 B:ASP256 4.5 42.3 1.0
O3G B:ATP905 4.6 99.7 1.0
CD B:GLU257 4.6 37.8 1.0
N B:GLU257 4.7 43.6 1.0
O B:GLY57 4.7 41.1 1.0
CB B:ALA309 4.7 44.9 1.0
CD B:LYS63 4.7 35.5 1.0
O B:GLY308 4.8 37.5 1.0
CA B:ALA309 4.8 40.8 1.0
C B:SER307 4.8 28.9 1.0
CB B:SER307 4.8 30.5 1.0
CG B:GLU257 4.9 32.4 1.0
CA B:GLU257 5.0 38.6 1.0

Magnesium binding site 2 out of 2 in 1do0

Go back to Magnesium Binding Sites List in 1do0
Magnesium binding site 2 out of 2 in the Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Orthorhombic Crystal Form of Heat Shock Locus U (Hslu) From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg605

b:39.9
occ:1.00
O1G E:ATP915 2.9 96.2 1.0
OD1 E:ASP256 3.5 32.8 1.0
CE E:LYS63 3.6 37.9 1.0
OE1 E:GLU257 3.8 54.6 1.0
OG E:SER307 3.9 43.4 1.0
NZ E:LYS63 3.9 40.4 1.0
PG E:ATP915 3.9 97.1 1.0
N E:ALA309 4.0 40.8 1.0
CA E:GLY308 4.1 28.9 1.0
O2G E:ATP915 4.1 99.5 1.0
C E:GLY308 4.2 35.2 1.0
N E:GLY308 4.3 28.9 1.0
CD E:GLU257 4.3 45.3 1.0
CG E:ASP256 4.4 41.5 1.0
OD2 E:ASP256 4.5 42.5 1.0
N E:GLU257 4.7 42.3 1.0
O3G E:ATP915 4.7 98.8 1.0
CB E:ALA309 4.7 46.3 1.0
CA E:ALA309 4.8 42.8 1.0
CG E:GLU257 4.8 41.5 1.0
O E:GLY57 4.8 36.0 1.0
O E:GLY308 4.9 39.9 1.0
CA E:GLU257 4.9 42.4 1.0
C E:SER307 4.9 28.9 1.0

Reference:

M.Bochtler, C.Hartmann, H.K.Song, G.P.Bourenkov, H.D.Bartunik, R.Huber. The Structures of Hsiu and the Atp-Dependent Protease Hsiu-Hsiv. Nature V. 403 800 2000.
ISSN: ISSN 0028-0836
PubMed: 10693812
DOI: 10.1038/35001629
Page generated: Mon Dec 14 05:50:37 2020

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