Magnesium in PDB 1ds6: Crystal Structure of A Rac-Rhogdi Complex

The structure of Crystal Structure of A Rac-Rhogdi Complex, PDB code: 1ds6 was solved by K.Scheffzek, I.Stephan, O.N.Jensen, D.Illenberger, P.Gierschik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.35
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	53.026, 61.922, 141.068, 90.00, 90.00, 90.00
R / Rfree (%)	23.4 / 26.7

The binding sites of Magnesium atom in the Crystal Structure of A Rac-Rhogdi Complex (pdb code 1ds6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Rac-Rhogdi Complex, PDB code: 1ds6:

Magnesium binding site 1 out of 1 in the Crystal Structure of A Rac-Rhogdi Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Rac-Rhogdi Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg193 b:19.9 occ:1.00 O2B A:GDP194 2.3 16.7 1.0 O A:HOH550 2.3 14.7 1.0 O A:THR35 2.3 18.2 1.0 OG1 A:THR17 2.3 16.5 1.0 O A:HOH509 2.3 7.0 1.0 O A:HOH539 2.3 19.9 1.0 PB A:GDP194 3.3 14.8 1.0 C A:THR35 3.3 17.2 1.0 O3B A:GDP194 3.4 12.5 1.0 CB A:THR17 3.4 14.1 1.0 O2A A:GDP194 3.9 15.4 1.0 CA A:THR35 4.1 16.3 1.0 O A:PRO34 4.1 21.6 1.0 N A:THR17 4.1 14.2 1.0 O3A A:GDP194 4.2 15.3 1.0 OD2 A:ASP57 4.2 16.0 1.0 N A:VAL36 4.3 18.2 1.0 CA A:THR17 4.4 14.6 1.0 O A:HOH549 4.4 18.6 1.0 O A:HOH501 4.4 10.4 1.0 O1B A:GDP194 4.4 12.8 1.0 CG2 A:THR17 4.5 14.0 1.0 CA A:VAL36 4.5 21.0 1.0 PA A:GDP194 4.5 13.4 1.0 OD1 A:ASP57 4.7 10.3 1.0 O1A A:GDP194 4.7 17.3 1.0 CG2 A:THR35 4.8 12.7 1.0 CG A:ASP57 4.9 15.4 1.0 O A:THR58 4.9 13.3 1.0 O A:HOH576 4.9 21.6 1.0 C A:PRO34 5.0 20.5 1.0 CE A:LYS16 5.0 11.8 1.0 CB A:LYS16 5.0 13.6 1.0

K.Scheffzek, I.Stephan, O.N.Jensen, D.Illenberger, P.Gierschik. The Rac-Rhogdi Complex and the Structural Basis For the Regulation of Rho Proteins By Rhogdi. Nat.Struct.Biol. V. 7 122 2000.
ISSN: ISSN 1072-8368
PubMed: 10655614
DOI: 10.1038/72392