Atomistry » Magnesium » PDB 1e9a-1en9 » 1eft
Atomistry »
  Magnesium »
    PDB 1e9a-1en9 »
      1eft »

Magnesium in PDB 1eft: The Crystal Structure of Elongation Factor Ef-Tu From Thermus Aquaticus in the Gtp Conformation

Protein crystallography data

The structure of The Crystal Structure of Elongation Factor Ef-Tu From Thermus Aquaticus in the Gtp Conformation, PDB code: 1eft was solved by M.Kjeldgaard, P.Nissen, S.Thirup, J.Nyborg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 150.700, 99.700, 40.200, 90.00, 95.30, 90.00
R / Rfree (%) 20 / n/a

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of Elongation Factor Ef-Tu From Thermus Aquaticus in the Gtp Conformation (pdb code 1eft). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of Elongation Factor Ef-Tu From Thermus Aquaticus in the Gtp Conformation, PDB code: 1eft:

Magnesium binding site 1 out of 1 in 1eft

Go back to Magnesium Binding Sites List in 1eft
Magnesium binding site 1 out of 1 in the The Crystal Structure of Elongation Factor Ef-Tu From Thermus Aquaticus in the Gtp Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of Elongation Factor Ef-Tu From Thermus Aquaticus in the Gtp Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg407

b:2.6
occ:1.00
OG1 A:THR25 2.2 3.3 1.0
O3G A:GNP406 2.2 10.9 1.0
OG1 A:THR62 2.2 20.6 1.0
O2B A:GNP406 2.3 26.1 1.0
O A:HOH490 2.3 24.1 1.0
O A:HOH491 2.3 22.3 1.0
N3B A:GNP406 3.0 10.0 1.0
CB A:THR62 3.2 8.6 1.0
CB A:THR25 3.2 6.0 1.0
PB A:GNP406 3.3 21.4 1.0
PG A:GNP406 3.4 11.4 1.0
N A:THR25 3.9 21.0 1.0
CA A:THR25 4.1 7.6 1.0
O1G A:GNP406 4.1 14.1 1.0
CG2 A:THR62 4.1 21.3 1.0
OD2 A:ASP81 4.2 27.5 1.0
O1B A:GNP406 4.2 10.5 1.0
N A:THR62 4.2 18.1 1.0
OD1 A:ASP51 4.2 17.7 1.0
CA A:THR62 4.3 12.4 1.0
OD2 A:ASP51 4.3 18.6 1.0
O3A A:GNP406 4.3 12.9 1.0
CG2 A:THR25 4.4 13.9 1.0
O1A A:GNP406 4.4 10.3 1.0
O2G A:GNP406 4.5 24.4 1.0
O A:CYS82 4.7 16.6 1.0
CG A:ASP51 4.7 15.3 1.0
PA A:GNP406 4.7 2.0 1.0
CB A:LYS24 4.8 7.5 1.0
CE A:LYS24 4.8 6.0 1.0
OD1 A:ASP81 4.8 16.9 1.0
O2A A:GNP406 4.8 11.5 1.0
CG A:ASP81 4.9 17.5 1.0
C A:LYS24 4.9 9.0 1.0

Reference:

M.Kjeldgaard, P.Nissen, S.Thirup, J.Nyborg. The Crystal Structure of Elongation Factor Ef-Tu From Thermus Aquaticus in the Gtp Conformation. Structure V. 1 35 1993.
ISSN: ISSN 0969-2126
PubMed: 8069622
DOI: 10.1016/0969-2126(93)90007-4
Page generated: Mon Dec 14 05:52:07 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy