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Magnesium in PDB 1fd5: Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex)

Protein crystallography data

The structure of Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex), PDB code: 1fd5 was solved by X.-L.Yang, H.Robinson, Y.-G.Gao, A.H.-J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.10
Space group C 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 29.584, 54.038, 40.215, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 20.3

Other elements in 1fd5:

The structure of Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex) also contains other interesting chemical elements:

Cobalt (Co) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex) (pdb code 1fd5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex), PDB code: 1fd5:

Magnesium binding site 1 out of 1 in 1fd5

Go back to Magnesium Binding Sites List in 1fd5
Magnesium binding site 1 out of 1 in the Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg23

b:35.8
occ:0.50
O B:HOH172 2.0 22.0 0.5
O B:HOH173 2.0 39.1 1.0
OP2 B:DG8 2.1 26.1 1.0
P B:DG8 3.6 24.3 1.0
O5' B:DG8 4.1 26.7 1.0
C5' B:DG8 4.2 24.0 1.0
O4' B:DG8 4.4 26.2 1.0
OP1 B:DG8 4.5 25.3 1.0
O3' B:DC7 4.5 22.5 1.0

Reference:

X.L.Yang, H.Robinson, Y.G.Gao, A.H.Wang. Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms. Biochemistry V. 39 10950 2000.
ISSN: ISSN 0006-2960
PubMed: 10998231
DOI: 10.1021/BI001319Z
Page generated: Mon Dec 14 05:55:37 2020

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