Atomistry » Magnesium » PDB 1fp6-1g7t » 1fqk
Atomistry »
  Magnesium »
    PDB 1fp6-1g7t »
      1fqk »

Magnesium in PDB 1fqk: Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)]

Protein crystallography data

The structure of Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)], PDB code: 1fqk was solved by K.C.Slep, M.A.Kercher, W.He, C.W.Cowan, T.G.Wensel, P.B.Sigler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 96.785, 115.073, 136.460, 90.00, 90.00, 90.00
R / Rfree (%) 23.1 / 26.8

Other elements in 1fqk:

The structure of Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)] also contains other interesting chemical elements:

Fluorine (F) 8 atoms
Aluminium (Al) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)] (pdb code 1fqk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)], PDB code: 1fqk:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 1fqk

Go back to Magnesium Binding Sites List in 1fqk
Magnesium binding site 1 out of 2 in the Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)]


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)] within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg352

b:47.9
occ:1.00
O A:HOH364 2.2 44.7 1.0
OG A:SER43 2.3 53.8 1.0
F1 A:ALF362 2.4 55.0 1.0
OG1 A:THR177 2.4 58.8 1.0
O A:HOH365 2.4 49.8 1.0
O2B A:GDP360 2.6 53.9 1.0
CG2 A:THR177 2.8 61.7 1.0
CB A:SER43 2.9 49.8 1.0
CB A:THR177 3.1 57.3 1.0
F4 A:ALF362 3.1 50.2 1.0
AL A:ALF362 3.7 51.9 1.0
N A:THR177 3.9 49.1 1.0
PB A:GDP360 3.9 56.3 1.0
N A:SER43 3.9 52.1 1.0
O2A A:GDP360 4.0 52.0 1.0
CA A:SER43 4.0 51.2 1.0
CA A:THR177 4.1 51.2 1.0
O A:VAL175 4.1 45.7 1.0
OD1 A:ASP196 4.2 62.3 1.0
O3B A:GDP360 4.6 57.0 1.0
O A:HOH408 4.6 57.4 1.0
OD2 A:ASP196 4.7 57.3 1.0
O3A A:GDP360 4.7 54.3 1.0
PA A:GDP360 4.7 50.7 1.0
NH1 A:ARG174 4.7 45.0 1.0
O A:VAL197 4.7 58.7 1.0
O1A A:GDP360 4.8 48.7 1.0
O A:HOH363 4.8 56.8 1.0
F3 A:ALF362 4.8 49.8 1.0
CG A:ASP196 4.9 61.7 1.0
O1B A:GDP360 4.9 60.8 1.0
C A:LYS176 5.0 47.0 1.0

Magnesium binding site 2 out of 2 in 1fqk

Go back to Magnesium Binding Sites List in 1fqk
Magnesium binding site 2 out of 2 in the Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)]


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Heterodimeric Complex of the Rgs Domain of RGS9, and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Gt/I1ALPHA)-(Gdp)- (ALF4-)-(MG2+)] within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg352

b:58.0
occ:1.00
O C:HOH366 2.3 45.5 1.0
OG C:SER43 2.3 60.2 1.0
F1 C:ALF363 2.3 52.2 1.0
O2B C:GDP361 2.3 55.7 1.0
OG1 C:THR177 2.4 49.8 1.0
O C:HOH365 2.4 40.8 1.0
CB C:SER43 2.7 53.3 1.0
N C:SER43 3.2 53.2 1.0
CB C:THR177 3.4 46.6 1.0
CA C:SER43 3.4 55.2 1.0
PB C:GDP361 3.7 61.0 1.0
OD1 C:ASP196 3.8 58.7 1.0
AL C:ALF363 3.9 52.5 1.0
OD2 C:ASP196 4.0 57.4 1.0
F4 C:ALF363 4.0 55.4 1.0
O2A C:GDP361 4.2 56.7 1.0
CG2 C:THR177 4.3 42.7 1.0
CG C:ASP196 4.3 60.0 1.0
C C:LYS42 4.3 50.4 1.0
O1B C:GDP361 4.3 67.2 1.0
CB C:LYS42 4.3 40.2 1.0
F3 C:ALF363 4.5 44.4 1.0
O1A C:GDP361 4.6 58.0 1.0
O3A C:GDP361 4.6 58.3 1.0
N C:THR177 4.6 44.6 1.0
O C:VAL197 4.6 52.8 1.0
O3B C:GDP361 4.6 66.0 1.0
CA C:THR177 4.6 45.2 1.0
PA C:GDP361 4.7 50.2 1.0
C C:SER43 4.8 57.1 1.0
CA C:LYS42 4.8 46.7 1.0
O C:VAL175 4.9 49.0 1.0
CE C:LYS42 4.9 41.6 1.0
O C:HOH364 5.0 49.8 1.0

Reference:

K.C.Slep, M.A.Kercher, W.He, C.W.Cowan, T.G.Wensel, P.B.Sigler. Structural Determinants For Regulation of Phosphodiesterase By A G Protein at 2.0 A. Nature V. 409 1071 2001.
ISSN: ISSN 0028-0836
PubMed: 11234020
DOI: 10.1038/35059138
Page generated: Tue Aug 13 03:34:49 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy