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Magnesium in PDB 1g3r: Crystal Structure Analysis of Pyrococcus Furiosus Cell Division Atpase Mind

Protein crystallography data

The structure of Crystal Structure Analysis of Pyrococcus Furiosus Cell Division Atpase Mind, PDB code: 1g3r was solved by I.Hayashi, T.Oyama, K.Morikawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.73 / 2.70
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 98.644, 98.644, 98.644, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 25.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure Analysis of Pyrococcus Furiosus Cell Division Atpase Mind (pdb code 1g3r). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure Analysis of Pyrococcus Furiosus Cell Division Atpase Mind, PDB code: 1g3r:

Magnesium binding site 1 out of 1 in 1g3r

Go back to Magnesium Binding Sites List in 1g3r
Magnesium binding site 1 out of 1 in the Crystal Structure Analysis of Pyrococcus Furiosus Cell Division Atpase Mind


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analysis of Pyrococcus Furiosus Cell Division Atpase Mind within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg239

b:33.0
occ:1.00
OG1 A:THR17 2.3 35.6 1.0
O3G A:ACP238 2.3 52.4 1.0
O A:HOH296 2.5 34.6 1.0
O2B A:ACP238 2.5 49.1 1.0
O A:HOH297 2.6 49.9 1.0
O A:HOH309 2.6 49.7 1.0
C3B A:ACP238 3.3 50.1 1.0
PG A:ACP238 3.3 51.8 1.0
PB A:ACP238 3.5 49.2 1.0
CB A:THR17 3.6 36.4 1.0
O2G A:ACP238 3.8 52.0 1.0
OD2 A:ASP118 4.0 41.4 1.0
OD2 A:ASP40 4.3 41.0 1.0
N A:THR17 4.4 37.7 1.0
NZ A:LYS16 4.4 43.9 1.0
CG2 A:THR17 4.4 35.6 1.0
O1G A:ACP238 4.4 52.6 1.0
O1B A:ACP238 4.5 48.6 1.0
O3A A:ACP238 4.5 48.5 1.0
O A:HOH270 4.5 42.0 1.0
CA A:THR17 4.5 36.1 1.0
OD1 A:ASP118 4.5 42.5 1.0
O1A A:ACP238 4.6 46.1 1.0
ND2 A:ASN45 4.6 41.7 1.0
CG A:ASP118 4.7 41.5 1.0
PA A:ACP238 4.9 46.9 1.0
CB A:ASN45 4.9 39.7 1.0

Reference:

I.Hayashi, T.Oyama, K.Morikawa. Structural and Functional Studies of Mind Atpase: Implications For the Molecular Recognition of the Bacterial Cell Division Apparatus. Embo J. V. 20 1819 2001.
ISSN: ISSN 0261-4189
PubMed: 11296216
DOI: 10.1093/EMBOJ/20.8.1819
Page generated: Sat Aug 9 21:13:44 2025

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