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Magnesium in PDB 1g8f: Atp Sulfurylase From S. Cerevisiae

Enzymatic activity of Atp Sulfurylase From S. Cerevisiae

All present enzymatic activity of Atp Sulfurylase From S. Cerevisiae:
2.7.7.4;

Protein crystallography data

The structure of Atp Sulfurylase From S. Cerevisiae, PDB code: 1g8f was solved by T.C.Ullrich, M.Blaesse, R.Huber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.68 / 1.95
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 187.094, 187.094, 115.999, 90.00, 90.00, 120.00
R / Rfree (%) 19.6 / 23.1

Other elements in 1g8f:

The structure of Atp Sulfurylase From S. Cerevisiae also contains other interesting chemical elements:

Cadmium (Cd) 5 atoms
Calcium (Ca) 3 atoms
Sodium (Na) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atp Sulfurylase From S. Cerevisiae (pdb code 1g8f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Atp Sulfurylase From S. Cerevisiae, PDB code: 1g8f:

Magnesium binding site 1 out of 1 in 1g8f

Go back to Magnesium Binding Sites List in 1g8f
Magnesium binding site 1 out of 1 in the Atp Sulfurylase From S. Cerevisiae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atp Sulfurylase From S. Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg521

b:28.7
occ:1.00
ND1 A:HIS166 2.0 32.3 1.0
O A:PRO164 2.2 25.8 1.0
CE1 A:HIS166 2.3 31.0 1.0
O A:HOH604 2.5 39.5 1.0
O A:HOH1101 2.6 37.5 1.0
OE1 A:GLU46 2.9 27.5 1.0
OE2 A:GLU46 3.0 27.6 1.0
CD A:GLU46 3.2 27.9 1.0
CG A:HIS166 3.3 32.2 1.0
C A:PRO164 3.4 28.2 1.0
NE2 A:HIS166 3.5 34.8 1.0
O A:HOH631 4.0 32.9 1.0
O A:HOH879 4.0 42.3 1.0
CD2 A:HIS166 4.0 29.8 1.0
CB A:HIS166 4.1 33.9 1.0
N A:PRO164 4.1 25.6 1.0
CA A:PRO164 4.1 26.6 1.0
CB A:PRO164 4.2 27.0 1.0
O A:HOH898 4.3 40.5 1.0
N A:HIS166 4.3 31.2 1.0
CB A:LEU163 4.3 24.0 1.0
N A:GLN165 4.4 28.4 1.0
C A:LEU163 4.4 25.3 1.0
C A:GLN165 4.4 30.7 1.0
CG A:GLU46 4.5 25.7 1.0
CA A:GLN165 4.6 31.3 1.0
CD A:PRO164 4.6 24.6 1.0
O A:LEU163 4.7 25.9 1.0
CA A:HIS166 4.8 33.6 1.0
O A:HOH549 4.9 21.4 1.0
O A:GLN165 4.9 29.4 1.0
O A:HOH641 5.0 32.7 1.0

Reference:

T.C.Ullrich, M.Blaesse, R.Huber. Crystal Structure of Atp Sulfurylase From Saccharomyces Cerevisiae, A Key Enzyme in Sulfate Activation. Embo J. V. 20 316 2001.
ISSN: ISSN 0261-4189
PubMed: 11157739
DOI: 10.1093/EMBOJ/20.3.316
Page generated: Mon Dec 14 05:57:26 2020

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