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Magnesium in PDB 1h6f: Human TBX3, A Transcription Factor Responsible For Ulnar-Mammary Syndrome, Bound to A Palindromic Dna Site

Protein crystallography data

The structure of Human TBX3, A Transcription Factor Responsible For Ulnar-Mammary Syndrome, Bound to A Palindromic Dna Site, PDB code: 1h6f was solved by M.Coll, C.W.Muller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.040, 104.910, 125.310, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 23.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human TBX3, A Transcription Factor Responsible For Ulnar-Mammary Syndrome, Bound to A Palindromic Dna Site (pdb code 1h6f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human TBX3, A Transcription Factor Responsible For Ulnar-Mammary Syndrome, Bound to A Palindromic Dna Site, PDB code: 1h6f:

Magnesium binding site 1 out of 1 in 1h6f

Go back to Magnesium Binding Sites List in 1h6f
Magnesium binding site 1 out of 1 in the Human TBX3, A Transcription Factor Responsible For Ulnar-Mammary Syndrome, Bound to A Palindromic Dna Site


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human TBX3, A Transcription Factor Responsible For Ulnar-Mammary Syndrome, Bound to A Palindromic Dna Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1286

b:35.7
occ:1.00
O A:HOH2015 2.0 36.4 1.0
O A:HOH2016 2.0 36.9 1.0
O A:HOH2049 2.0 35.9 1.0
OE2 A:GLU111 4.0 33.3 1.0
OE1 A:GLU111 4.1 29.2 1.0
O A:HOH2006 4.3 21.6 1.0
O A:HOH2010 4.5 32.5 1.0
CD A:GLU111 4.5 30.9 1.0
O A:HOH2014 4.5 34.8 1.0
O A:HOH2066 4.6 48.2 1.0

Reference:

M.Coll, J.G.Seidman, C.W.Muller. Structure of the Dna-Bound T-Box Domain of Human TBX3, A Transcription Factor Responsible For Ulnar- Mammary Syndrome Structure V. 10 343 2002.
ISSN: ISSN 0969-2126
PubMed: 12005433
DOI: 10.1016/S0969-2126(02)00722-0
Page generated: Mon Dec 14 05:58:43 2020

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