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Magnesium in PDB 1i9t: Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme

Enzymatic activity of Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme

All present enzymatic activity of Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme:
3.1.3.33;

Protein crystallography data

The structure of Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme, PDB code: 1i9t was solved by A.Changela, C.K.Ho, A.Martins, S.Shuman, A.Mondragon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.00 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 62.002, 98.961, 71.627, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 21.7

Other elements in 1i9t:

The structure of Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme also contains other interesting chemical elements:

Arsenic (As) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme (pdb code 1i9t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme, PDB code: 1i9t:

Magnesium binding site 1 out of 1 in 1i9t

Go back to Magnesium Binding Sites List in 1i9t
Magnesium binding site 1 out of 1 in the Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Oxidized Rna Triphosphatase Domain of Mouse Mrna Capping Enzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg500

b:14.1
occ:0.50
 O A:HOH813 2.0 14.9 0.5
O A:HOH811 2.0 14.7 0.5
O A:HOH816 2.0 14.8 0.5
O A:HOH812 2.0 15.4 0.5
O A:HOH815 2.0 16.2 0.5
O A:HOH814 2.1 14.2 0.5
O A:HOH656 3.9 24.6 1.0
O2 A:SO4300 4.1 19.5 1.0
O A:HOH688 4.2 24.4 1.0
OD1 A:ASP78 4.2 18.2 1.0
O4 A:SO4300 4.3 20.3 1.0
OD2 A:ASP78 4.4 16.9 1.0
CG A:PRO33 4.6 16.6 1.0
CG A:ASP78 4.8 16.6 1.0
O A:HOH621 4.8 25.1 1.0
S A:SO4300 4.9 18.2 1.0
CD A:PRO33 4.9 14.8 1.0

Reference:

A.Changela, C.K.Ho, A.Martins, S.Shuman, A.Mondragon. Structure and Mechanism of the Rna Triphosphatase Component of Mammalian Mrna Capping Enzyme. Embo J. V. 20 2575 2001.
ISSN: ISSN 0261-4189
PubMed: 11350947
DOI: 10.1093/EMBOJ/20.10.2575
Page generated: Tue Aug 13 04:37:04 2024

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