Magnesium in PDB 1izc: Crystal Structure Analysis of Macrophomate Synthase

The structure of Crystal Structure Analysis of Macrophomate Synthase, PDB code: 1izc was solved by T.Ose, K.Watanabe, T.Mie, M.Honma, H.Watanabe, M.Yao, H.Oikawa, I.Tanaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.70
Space group	P 63 2 2
Cell size a, b, c (Å), α, β, γ (°)	106.678, 106.678, 120.755, 90.00, 90.00, 120.00
R / Rfree (%)	17.6 / 20.3

The binding sites of Magnesium atom in the Crystal Structure Analysis of Macrophomate Synthase (pdb code 1izc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure Analysis of Macrophomate Synthase, PDB code: 1izc:

Magnesium binding site 1 out of 1 in the Crystal Structure Analysis of Macrophomate Synthase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analysis of Macrophomate Synthase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1001 b:21.8 occ:1.00 O3 A:PYR2001 2.1 19.7 1.0 OE1 A:GLU185 2.1 15.0 1.0 OD2 A:ASP211 2.1 15.8 1.0 O1 A:PYR2001 2.2 18.6 1.0 O A:HOH2036 2.2 14.9 1.0 O A:HOH2245 2.3 11.4 1.0 C2 A:PYR2001 2.8 18.4 1.0 C1 A:PYR2001 2.9 27.0 1.0 CD A:GLU185 3.1 20.0 1.0 CG A:ASP211 3.1 18.6 1.0 OE2 A:GLU185 3.4 16.0 1.0 CB A:ASP211 3.7 13.9 1.0 NH1 A:ARG101 3.9 13.4 1.0 CE1 A:HIS125 4.1 25.3 1.0 O2 A:PYR2001 4.1 26.2 1.0 OD1 A:ASP211 4.1 19.8 1.0 C3 A:PYR2001 4.2 17.6 1.0 CG A:GLU185 4.3 15.5 1.0 NE2 A:GLN183 4.4 15.8 1.0 OE1 A:GLU72 4.6 11.3 1.0 CB A:GLU185 4.6 15.7 1.0 NE2 A:HIS125 4.7 16.5 1.0 CD A:GLN183 4.7 12.7 1.0 N A:ASP211 4.7 14.5 1.0 OE1 A:GLN183 4.7 16.0 1.0 CZ A:ARG101 4.8 14.8 1.0 CA A:ASP211 4.8 13.6 1.0 ND1 A:HIS125 4.8 22.1 1.0 CA A:GLY208 4.9 13.0 1.0 NH2 A:ARG101 5.0 14.0 1.0

T.Ose, K.Watanabe, T.Mie, M.Honma, H.Watanabe, M.Yao, H.Oikawa, I.Tanaka. Insight Into A Natural Diels-Alder Reaction From the Structure of Macrophomate Synthase. Nature V. 422 185 2003.
ISSN: ISSN 0028-0836
PubMed: 12634789
DOI: 10.1038/NATURE01454