Magnesium in PDB 1jm1: Crystal Structure of the Soluble Domain of the Rieske Protein II (Soxf) From Sulfolobus Acidocaldarius

The structure of Crystal Structure of the Soluble Domain of the Rieske Protein II (Soxf) From Sulfolobus Acidocaldarius, PDB code: 1jm1 was solved by H.Boenisch, C.L.Schmidt, G.Schaefer, R.Ladenstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.11
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	80.252, 80.252, 75.624, 90.00, 90.00, 120.00
R / Rfree (%)	10.6 / 12.5

The structure of Crystal Structure of the Soluble Domain of the Rieske Protein II (Soxf) From Sulfolobus Acidocaldarius also contains other interesting chemical elements:

Iron

(Fe)

2 atoms

The binding sites of Magnesium atom in the Crystal Structure of the Soluble Domain of the Rieske Protein II (Soxf) From Sulfolobus Acidocaldarius (pdb code 1jm1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Soluble Domain of the Rieske Protein II (Soxf) From Sulfolobus Acidocaldarius, PDB code: 1jm1:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Soluble Domain of the Rieske Protein II (Soxf) From Sulfolobus Acidocaldarius


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Soluble Domain of the Rieske Protein II (Soxf) From Sulfolobus Acidocaldarius within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:20.9 occ:1.00 O A:HOH658 2.0 18.6 1.0 O A:HOH813 2.0 22.1 1.0 O A:HOH802 2.1 24.4 1.0 O A:HOH657 2.1 19.8 1.0 OD2 A:ASP167 2.1 17.5 1.0 O A:HOH692 2.1 30.0 1.0 CG A:ASP167 3.0 14.3 1.0 OD1 A:ASP167 3.3 15.6 1.0 HA3 A:GLY165 3.8 17.9 1.0 OE2 A:GLU156 4.0 41.7 1.0 O A:GLY165 4.2 14.4 1.0 O A:HOH668 4.2 26.1 1.0 O A:HOH799 4.2 39.5 1.0 O A:HOH715 4.3 40.2 1.0 O A:HOH786 4.3 35.5 1.0 HG21 A:VAL186 4.4 21.9 1.0 CB A:ASP167 4.4 12.3 1.0 O A:HOH629 4.5 18.3 1.0 HD1 A:TYR162 4.5 20.7 1.0 CA A:GLY165 4.5 14.9 1.0 HA2 A:GLY165 4.5 17.9 1.0 HB2 A:ASP167 4.5 14.8 1.0 HE1 A:TYR162 4.6 23.3 1.0 O A:HOH719 4.7 49.0 1.0 HG2 A:GLU156 4.8 38.2 1.0 C A:GLY165 4.8 13.8 1.0 HB3 A:ASP167 4.8 14.8 1.0

H.Bonisch, C.L.Schmidt, G.Schafer, R.Ladenstein. The Structure of the Soluble Domain of An Archaeal Rieske Iron-Sulfur Protein at 1.1 A Resolution. J.Mol.Biol. V. 319 791 2002.
ISSN: ISSN 0022-2836
PubMed: 12054871
DOI: 10.1016/S0022-2836(02)00323-6