Atomistry » Magnesium » PDB 1jcg-1jwy » 1js9
Atomistry »
  Magnesium »
    PDB 1jcg-1jwy »
      1js9 »

Magnesium in PDB 1js9: Brome Mosaic Virus

Protein crystallography data

The structure of Brome Mosaic Virus, PDB code: 1js9 was solved by R.W.Lucas, S.B.Larson, A.Mcpherson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.70 / 3.40
Space group H 3 5
Cell size a, b, c (Å), α, β, γ (°) 269.244, 269.244, 638.136, 90.00, 90.00, 120.00
R / Rfree (%) 23.8 / 25

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Brome Mosaic Virus (pdb code 1js9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Brome Mosaic Virus, PDB code: 1js9:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 1js9

Go back to Magnesium Binding Sites List in 1js9
Magnesium binding site 1 out of 2 in the Brome Mosaic Virus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Brome Mosaic Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1002

b:55.0
occ:0.20
OE2 A:GLU131 4.8 1.0 1.0

Magnesium binding site 2 out of 2 in 1js9

Go back to Magnesium Binding Sites List in 1js9
Magnesium binding site 2 out of 2 in the Brome Mosaic Virus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Brome Mosaic Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg1001

b:58.4
occ:1.00
OE1 B:GLU84 2.3 0.6 1.0
OE2 A:GLU84 2.4 0.6 1.0
OE1 C:GLU84 2.5 0.5 1.0
OE2 C:GLU84 2.8 0.3 1.0
CD C:GLU84 3.0 0.9 1.0
OG1 C:THR145 3.4 0.7 1.0
CD B:GLU84 3.5 0.7 1.0
CD A:GLU84 3.7 0.1 1.0
OE2 B:GLU84 4.0 0.7 1.0
OG1 B:THR145 4.1 0.2 1.0
OG1 A:THR145 4.3 0.0 1.0
OE1 A:GLU84 4.4 0.4 1.0
CG C:GLU84 4.5 0.3 1.0
CB C:THR145 4.6 0.4 1.0
CG A:GLU84 4.7 0.1 1.0
CG B:GLU84 4.7 83.8 1.0
CG2 C:THR145 4.7 100.0 1.0

Reference:

R.W.Lucas, S.B.Larson, A.Mcpherson. The Crystallographic Structure of Brome Mosaic Virus. J.Mol.Biol. V. 317 95 2002.
ISSN: ISSN 0022-2836
PubMed: 11916381
DOI: 10.1006/JMBI.2001.5389
Page generated: Tue Aug 13 06:39:08 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy