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Magnesium in PDB 1l3p: Crystal Structure of the Functional Domain of the Major Grass Pollen Allergen Phl P 5B

Protein crystallography data

The structure of Crystal Structure of the Functional Domain of the Major Grass Pollen Allergen Phl P 5B, PDB code: 1l3p was solved by K.R.Rajashankar, A.Bufe, W.Weber, S.Eschenburg, B.Lindner, C.Betzel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.00 / 1.98
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 38.975, 50.355, 107.804, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 24.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Functional Domain of the Major Grass Pollen Allergen Phl P 5B (pdb code 1l3p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Functional Domain of the Major Grass Pollen Allergen Phl P 5B, PDB code: 1l3p:

Magnesium binding site 1 out of 1 in 1l3p

Go back to Magnesium Binding Sites List in 1l3p
Magnesium binding site 1 out of 1 in the Crystal Structure of the Functional Domain of the Major Grass Pollen Allergen Phl P 5B


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Functional Domain of the Major Grass Pollen Allergen Phl P 5B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg350

b:25.4
occ:1.00
OG1 A:THR170 2.8 12.2 1.0
O A:HOH253 2.8 27.6 1.0
CB A:THR170 3.5 13.6 1.0
CA A:THR170 3.6 12.4 1.0
CG2 A:THR170 3.7 15.3 1.0
O A:HOH323 4.2 35.4 1.0
O A:HOH305 4.4 18.2 1.0
N A:THR170 4.5 10.7 1.0
CB A:ALA173 4.6 15.1 1.0
C A:THR170 4.7 11.5 1.0
O A:THR170 4.7 13.5 1.0
O A:HOH316 4.9 44.1 1.0

Reference:

K.Rajashankar, A.Bufe, W.Weber, S.Eschenburg, B.Lindner, C.Betzel. Structure of the Functional Domain of the Major Grass-Pollen Allergen Phlp 5B. Acta Crystallogr.,Sect.D V. 58 1175 2002.
ISSN: ISSN 0907-4449
PubMed: 12077438
DOI: 10.1107/S0907444902007254
Page generated: Mon Dec 14 06:22:53 2020

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