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Magnesium in PDB 1laj: The Structure of Tomato Aspermy Virus By X-Ray Crystallography

Protein crystallography data

The structure of The Structure of Tomato Aspermy Virus By X-Ray Crystallography, PDB code: 1laj was solved by R.W.Lucas, S.B.Larson, M.A.Canady, A.Mcpherson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 3.40
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 294.296, 327.393, 382.066, 90.00, 90.00, 90.00
R / Rfree (%) 21.8 / 22.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of Tomato Aspermy Virus By X-Ray Crystallography (pdb code 1laj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Structure of Tomato Aspermy Virus By X-Ray Crystallography, PDB code: 1laj:

Magnesium binding site 1 out of 1 in 1laj

Go back to Magnesium Binding Sites List in 1laj
Magnesium binding site 1 out of 1 in the The Structure of Tomato Aspermy Virus By X-Ray Crystallography


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of Tomato Aspermy Virus By X-Ray Crystallography within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg2000

b:92.1
occ:1.00
OE2 C:GLU175 3.4 98.7 1.0
OE1 B:GLU175 3.4 94.7 1.0
OE1 C:GLU175 3.6 0.8 1.0
OE1 A:GLU175 3.9 97.2 1.0
CD C:GLU175 3.9 96.3 1.0
OE2 A:GLU175 3.9 84.5 1.0
CE B:LYS101 4.1 0.5 1.0
CD A:GLU175 4.3 85.4 1.0
CD B:GLU175 4.4 78.0 1.0
OE2 B:GLU175 4.6 57.4 1.0
CD C:LYS101 4.6 86.4 1.0
CD B:LYS101 4.7 0.1 1.0
CE A:LYS101 4.8 95.7 1.0
CE C:LYS101 5.0 75.6 1.0

Reference:

R.W.Lucas, S.B.Larson, M.A.Canady, A.Mcpherson. The Structure of Tomato Aspermy Virus By X-Ray Crystallography J.Struct.Biol. V. 139 90 2002.
ISSN: ISSN 1047-8477
PubMed: 12406691
DOI: 10.1016/S1047-8477(02)00561-0
Page generated: Tue Aug 13 08:29:09 2024

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