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Magnesium in PDB 1lo6: Human Kallikrein 6 (HK6) Active Form with Benzamidine Inhibitor at 1.56 A Resolution

Protein crystallography data

The structure of Human Kallikrein 6 (HK6) Active Form with Benzamidine Inhibitor at 1.56 A Resolution, PDB code: 1lo6 was solved by M.J.Bernett, S.I.Blaber, I.A.Scarisbrick, P.Dhanarajan, S.M.Thompson, M.Blaber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.97 / 1.56
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.207, 61.814, 85.838, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 22.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human Kallikrein 6 (HK6) Active Form with Benzamidine Inhibitor at 1.56 A Resolution (pdb code 1lo6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Kallikrein 6 (HK6) Active Form with Benzamidine Inhibitor at 1.56 A Resolution, PDB code: 1lo6:

Magnesium binding site 1 out of 1 in 1lo6

Go back to Magnesium Binding Sites List in 1lo6
Magnesium binding site 1 out of 1 in the Human Kallikrein 6 (HK6) Active Form with Benzamidine Inhibitor at 1.56 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Kallikrein 6 (HK6) Active Form with Benzamidine Inhibitor at 1.56 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg443

b:34.8
occ:1.00
O A:HOH341 2.0 29.6 1.0
O A:HOH424 2.0 41.3 1.0
O A:HOH419 2.1 41.0 1.0
O A:HOH433 2.1 40.0 1.0
O A:HOH434 2.2 35.4 1.0
O A:HOH357 2.3 39.0 1.0
O A:HOH361 4.0 30.0 1.0
O A:ASP93 4.1 26.1 1.0
OD2 A:ASP95 4.4 24.8 1.0
O A:HOH411 4.6 47.1 1.0
OD1 A:ASP93 4.7 46.8 1.0
C A:ASP93 4.8 23.6 1.0
CB A:ASP93 4.8 31.3 1.0
CA A:ASP93 4.8 26.2 1.0
CB A:ASP95 4.9 18.6 1.0

Reference:

M.J.Bernett, S.I.Blaber, I.A.Scarisbrick, P.Dhanarajan, S.M.Thompson, M.Blaber. Crystal Structure and Biochemical Characterization of Human Kallikrein 6 Reveals A Trypsin-Like Kallikrein Is Expressed in the Central Nervous System To Be Published.
Page generated: Tue Aug 13 08:34:42 2024

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