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Magnesium in PDB 1mpn: Maltoporin Maltotriose Complex

Protein crystallography data

The structure of Maltoporin Maltotriose Complex, PDB code: 1mpn was solved by R.Dutzler, T.Schirmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 3.20
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 131.900, 214.800, 220.200, 90.00, 90.00, 90.00
R / Rfree (%) 21.8 / 23.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Maltoporin Maltotriose Complex (pdb code 1mpn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Maltoporin Maltotriose Complex, PDB code: 1mpn:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 1mpn

Go back to Magnesium Binding Sites List in 1mpn
Magnesium binding site 1 out of 3 in the Maltoporin Maltotriose Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Maltoporin Maltotriose Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg422

b:11.7
occ:0.33
MG C:MG422 0.4 11.7 0.3
MG B:MG422 0.5 11.7 0.3
OD1 B:ASP78 2.2 39.4 1.0
OD1 C:ASP78 2.2 39.4 1.0
OD1 A:ASP78 2.5 39.4 1.0
OD2 B:ASP78 2.6 40.0 1.0
CG B:ASP78 2.7 33.7 1.0
OD2 C:ASP78 2.8 40.0 1.0
CG C:ASP78 2.9 33.7 1.0
OD2 A:ASP78 3.0 40.0 1.0
CG A:ASP78 3.2 33.7 1.0
CB B:ASP78 4.3 24.6 1.0
CB C:ASP78 4.4 24.6 1.0
CB A:ASP78 4.7 24.6 1.0
CA B:ASP78 5.0 21.2 1.0

Magnesium binding site 2 out of 3 in 1mpn

Go back to Magnesium Binding Sites List in 1mpn
Magnesium binding site 2 out of 3 in the Maltoporin Maltotriose Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Maltoporin Maltotriose Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg422

b:11.7
occ:0.33
MG A:MG422 0.5 11.7 0.3
MG C:MG422 0.6 11.7 0.3
OD1 C:ASP78 2.2 39.4 1.0
OD1 A:ASP78 2.2 39.4 1.0
OD2 C:ASP78 2.5 40.0 1.0
OD1 B:ASP78 2.5 39.4 1.0
CG C:ASP78 2.7 33.7 1.0
OD2 A:ASP78 3.0 40.0 1.0
CG A:ASP78 3.0 33.7 1.0
OD2 B:ASP78 3.0 40.0 1.0
CG B:ASP78 3.2 33.7 1.0
CB C:ASP78 4.2 24.6 1.0
CB A:ASP78 4.5 24.6 1.0
CB B:ASP78 4.7 24.6 1.0
CA C:ASP78 4.9 21.2 1.0

Magnesium binding site 3 out of 3 in 1mpn

Go back to Magnesium Binding Sites List in 1mpn
Magnesium binding site 3 out of 3 in the Maltoporin Maltotriose Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Maltoporin Maltotriose Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg422

b:11.7
occ:0.33
MG A:MG422 0.4 11.7 0.3
MG B:MG422 0.6 11.7 0.3
OD1 B:ASP78 2.2 39.4 1.0
OD1 A:ASP78 2.3 39.4 1.0
OD1 C:ASP78 2.5 39.4 1.0
OD2 A:ASP78 2.7 40.0 1.0
OD2 B:ASP78 2.8 40.0 1.0
CG B:ASP78 2.8 33.7 1.0
CG A:ASP78 2.9 33.7 1.0
OD2 C:ASP78 3.0 40.0 1.0
CG C:ASP78 3.2 33.7 1.0
CB B:ASP78 4.4 24.6 1.0
CB A:ASP78 4.4 24.6 1.0
CB C:ASP78 4.7 24.6 1.0

Reference:

R.Dutzler, Y.F.Wang, P.J.Rizkallah, J.P.Rosenbusch, T.Schirmer. Crystal Structures of Various Maltooligosaccharides Bound to Maltoporin Reveal A Specific Sugar Translocation Pathway. Structure V. 4 127 1996.
ISSN: ISSN 0969-2126
PubMed: 8805519
DOI: 10.1016/S0969-2126(96)00016-0
Page generated: Mon Dec 14 06:29:28 2020

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