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Magnesium in PDB 1n2e: Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate

Enzymatic activity of Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate

All present enzymatic activity of Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate:
6.3.2.1;

Protein crystallography data

The structure of Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate, PDB code: 1n2e was solved by S.Wang, D.Eisenberg, Tb Structural Genomics Consortium (Tbsgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.82 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.274, 70.824, 81.798, 90.00, 99.28, 90.00
R / Rfree (%) 18.8 / 20.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate (pdb code 1n2e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate, PDB code: 1n2e:

Magnesium binding site 1 out of 1 in 1n2e

Go back to Magnesium Binding Sites List in 1n2e
Magnesium binding site 1 out of 1 in the Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Pantothenate Synthetase From M. Tuberculosis in Complex with Ampcpp and Pantoate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg901

b:27.9
occ:1.00
 O1G B:APC802 2.1 28.6 1.0
O2B B:APC802 2.1 29.6 1.0
O2A B:APC802 2.1 28.9 1.0
O B:HOH1065 2.2 28.7 1.0
O B:HOH944 2.2 24.6 1.0
PB B:APC802 3.1 28.6 1.0
PA B:APC802 3.2 28.1 1.0
PG B:APC802 3.3 25.9 1.0
O3B B:APC802 3.3 28.0 1.0
C3A B:APC802 3.6 23.7 1.0
O B:HOH1061 3.7 51.5 1.0
O5' B:APC802 3.9 26.8 1.0
NH2 B:ARG198 4.0 32.5 1.0
OD1 B:ASP161 4.2 19.6 1.0
OD2 B:ASP161 4.2 20.3 1.0
NZ B:LYS160 4.2 24.4 1.0
O B:HOH1012 4.3 27.9 1.0
O2G B:APC802 4.3 26.5 1.0
O3G B:APC802 4.3 25.4 1.0
O1B B:APC802 4.4 25.5 1.0
O1A B:APC802 4.5 32.6 1.0
CG B:ASP161 4.5 17.5 1.0
CE B:LYS160 4.7 26.8 1.0
OG B:SER196 4.9 28.3 1.0
CZ B:ARG198 4.9 37.0 1.0

Reference:

S.Wang, D.Eisenberg. Crystal Structures of A Pantothenate Synthetase From M. Tuberculosis and Its Complexes with Substrates and A Reaction Intermediate Protein Sci. V. 12 1097 2003.
ISSN: ISSN 0961-8368
PubMed: 12717031
DOI: 10.1110/PS.0241803
Page generated: Mon Dec 14 06:30:28 2020

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