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Magnesium in PDB 1nel: Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution

Enzymatic activity of Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution

All present enzymatic activity of Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution:
4.2.1.11;

Protein crystallography data

The structure of Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution, PDB code: 1nel was solved by L.Lebioda, E.Zhang, K.Lewinski, M.J.Brewer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.60
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 122.500, 122.500, 67.000, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Other elements in 1nel:

The structure of Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution also contains other interesting chemical elements:

Fluorine (F) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution (pdb code 1nel). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution, PDB code: 1nel:

Magnesium binding site 1 out of 1 in 1nel

Go back to Magnesium Binding Sites List in 1nel
Magnesium binding site 1 out of 1 in the Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-MG2+-F--Pi Complex at 2.6-Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg438

b:17.2
occ:1.00
 O A:HOH450 2.0 20.3 1.0
OD2 A:ASP320 2.0 17.1 1.0
F A:F451 2.1 13.5 1.0
OE2 A:GLU295 2.1 14.4 1.0
OD2 A:ASP246 2.1 19.7 1.0
CD A:GLU295 3.1 13.6 1.0
CG A:ASP246 3.1 20.1 1.0
NZ A:LYS396 3.2 9.7 1.0
CG A:ASP320 3.2 15.8 1.0
OD1 A:ASP246 3.4 20.9 1.0
OE1 A:GLU295 3.6 12.6 1.0
O A:HOH674 3.7 9.1 1.0
CB A:ASP320 3.9 14.9 1.0
OD1 A:ASP320 4.2 14.9 1.0
CD2 A:LEU343 4.3 12.9 1.0
OE2 A:GLU168 4.3 19.1 1.0
CG A:GLU295 4.3 13.3 1.0
NZ A:LYS345 4.4 9.5 1.0
CB A:ASP246 4.4 19.1 1.0
CE A:LYS396 4.4 7.1 1.0
O3 A:PO4444 4.8 31.4 1.0
CD A:GLU168 5.0 20.8 1.0

Reference:

L.Lebioda, E.Zhang, K.Lewinski, J.M.Brewer. Fluoride Inhibition of Yeast Enolase: Crystal Structure of the Enolase-Mg(2+)-F(-)-Pi Complex at 2.6 A Resolution. Proteins V. 16 219 1993.
ISSN: ISSN 0887-3585
PubMed: 8346189
DOI: 10.1002/PROT.340160302
Page generated: Mon Dec 14 06:31:59 2020

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