Magnesium in PDB 1nlk: Crystal Structure of Myxococcus Xanthus Nucleoside Diphosphate Kinase and Its Interaction with A Nucleotide Substrate at 2.0 Angstroms Resolution

Enzymatic activity of Crystal Structure of Myxococcus Xanthus Nucleoside Diphosphate Kinase and Its Interaction with A Nucleotide Substrate at 2.0 Angstroms Resolution

Protein crystallography data

Magnesium Binding Sites:

Magnesium binding site 1 out of 2 in 1nlk

Magnesium Binding Sites List in 1nlk

Magnesium binding site 1 out of 2 in the Crystal Structure of Myxococcus Xanthus Nucleoside Diphosphate Kinase and Its Interaction with A Nucleotide Substrate at 2.0 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Myxococcus Xanthus Nucleoside Diphosphate Kinase and Its Interaction with A Nucleotide Substrate at 2.0 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ R:Mg146 b:20.0 occ:1.00 O2A R:ADP1 2.7 32.5 0.2 O1A R:ADP1 3.4 29.2 0.5 CE1 R:HIS54 3.7 44.1 1.0 O2A R:ADP1 3.7 27.0 0.5 PA R:ADP1 3.7 33.1 0.2 O3A R:ADP1 3.8 33.7 0.2 OD2 R:ASP120 3.8 34.8 1.0 NE2 R:HIS54 4.0 45.5 1.0 PA R:ADP1 4.1 25.4 0.5 O1A R:ADP1 4.5 38.5 0.2 CG R:ASP120 4.8 31.6 1.0 ND1 R:HIS54 4.9 43.2 1.0 O5' R:ADP1 4.9 33.3 0.2

Magnesium binding site 2 out of 2 in 1nlk

Magnesium Binding Sites List in 1nlk

Magnesium binding site 2 out of 2 in the Crystal Structure of Myxococcus Xanthus Nucleoside Diphosphate Kinase and Its Interaction with A Nucleotide Substrate at 2.0 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Myxococcus Xanthus Nucleoside Diphosphate Kinase and Its Interaction with A Nucleotide Substrate at 2.0 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ L:Mg146 b:20.0 occ:1.00 O1A L:ADP1 2.5 34.4 0.5 O3B L:ADP1 2.8 37.5 0.5 O3A L:ADP1 2.9 32.9 0.5 O3A L:ADP1 3.0 36.6 0.5 PA L:ADP1 3.2 34.6 0.5 PA L:ADP1 3.2 34.1 0.5 O1A L:ADP1 3.3 35.5 0.5 PB L:ADP1 3.4 41.5 0.5 OD2 L:ASP120 3.5 43.2 1.0 O2A L:ADP1 3.5 32.2 0.5 CB L:ASP120 3.5 29.6 1.0 O2B L:ADP1 3.6 36.3 0.5 O5' L:ADP1 3.9 29.2 0.5 CG L:ASP120 4.0 38.9 1.0 O3B L:ADP1 4.1 41.0 0.5 PB L:ADP1 4.1 39.9 0.5 O L:GLY118 4.2 11.4 1.0 CA L:ASP120 4.5 22.0 1.0 O2A L:ADP1 4.5 32.1 0.5 N L:ASP120 4.7 15.6 1.0 O1B L:ADP1 4.7 34.3 0.5 O5' L:ADP1 4.8 29.4 0.5 O1B L:ADP1 4.8 34.3 0.5

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