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Magnesium in PDB 1nv3: Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm)

Enzymatic activity of Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm)

All present enzymatic activity of Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm):
3.1.3.11;

Protein crystallography data

The structure of Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm), PDB code: 1nv3 was solved by J.Choe, C.V.Iancu, H.J.Fromm, R.B.Honzatko, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.00
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 52.361, 82.765, 165.288, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 26.6

Other elements in 1nv3:

The structure of Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm) also contains other interesting chemical elements:

Thallium (Tl) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm) (pdb code 1nv3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm), PDB code: 1nv3:

Magnesium binding site 1 out of 1 in 1nv3

Go back to Magnesium Binding Sites List in 1nv3
Magnesium binding site 1 out of 1 in the Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6- Phosphate, Phosphate and Thallium (100 Mm) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2341

b:22.6
occ:1.00
 O2 A:PO42340 1.9 31.7 1.0
O A:LEU1120 2.3 18.6 1.0
OE1 A:GLU1097 2.3 24.6 1.0
OD2 A:ASP1118 2.6 18.6 1.0
P A:PO42340 3.0 31.8 1.0
O4 A:PO42340 3.0 49.7 1.0
CD A:GLU1097 3.3 23.2 1.0
C A:LEU1120 3.4 18.7 1.0
TL A:TL2344 3.4 19.1 0.3
TL A:TL2343 3.6 23.9 0.3
OE2 A:GLU1098 3.7 32.8 1.0
OD1 A:ASP1074 3.7 35.2 1.0
CG A:ASP1118 3.7 18.9 1.0
OE2 A:GLU1097 3.7 31.3 1.0
O3 A:PO42340 3.9 34.2 1.0
O1 A:PO42340 4.0 24.9 1.0
CA A:ASP1121 4.0 23.2 1.0
OD1 A:ASP1118 4.1 23.1 1.0
N A:ASP1121 4.2 21.3 1.0
N A:LEU1120 4.2 11.2 1.0
CA A:LEU1120 4.3 22.2 1.0
OG A:SER1123 4.4 31.6 1.0
CG A:GLU1097 4.5 20.4 1.0
CG A:ASP1074 4.5 35.2 1.0
OD1 A:ASP1121 4.7 15.2 1.0
CB A:ASP1121 4.7 25.2 1.0
CB A:GLU1097 4.7 15.6 1.0
CB A:LEU1120 4.8 20.7 1.0
CD A:GLU1098 4.9 22.4 1.0
OD2 A:ASP1074 4.9 47.8 1.0
CD A:PRO1119 5.0 10.8 1.0

Reference:

J.Y.Choe, S.W.Nelson, H.J.Fromm, R.B.Honzatko. Interaction of Tl+ with Product Complexes of Fructose-1,6-Bisphosphatase J.Biol.Chem. V. 278 16008 2003.
ISSN: ISSN 0021-9258
PubMed: 12595529
DOI: 10.1074/JBC.M212394200
Page generated: Tue Aug 13 10:26:03 2024

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