Atomistry » Magnesium » PDB 1nzz-1oev » 1o6b
Atomistry »
  Magnesium »
    PDB 1nzz-1oev »
      1o6b »

Magnesium in PDB 1o6b: Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp

Enzymatic activity of Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp

All present enzymatic activity of Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp:
2.7.7.3;

Protein crystallography data

The structure of Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp, PDB code: 1o6b was solved by Structural Genomix, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.01 / 2.20
Space group P 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 115.420, 115.420, 115.420, 90.00, 90.00, 90.00
R / Rfree (%) 22.9 / 27.5

Other elements in 1o6b:

The structure of Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp (pdb code 1o6b). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp, PDB code: 1o6b:

Magnesium binding site 1 out of 1 in 1o6b

Go back to Magnesium Binding Sites List in 1o6b
Magnesium binding site 1 out of 1 in the Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Phosphopantetheine Adenylyltransferase with Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg171

b:19.2
occ:0.50
 O A:HOH218 2.1 30.1 1.0
O A:HOH174 2.3 19.7 1.0
OD1 A:ASP139 2.5 22.3 1.0
CG A:ASP139 3.8 25.2 1.0
O A:HOH185 3.9 30.8 1.0
CA A:ASP139 4.3 23.7 1.0
O A:ASP139 4.3 24.6 1.0
O A:HOH250 4.4 43.3 1.0
O A:HOH177 4.4 20.4 1.0
C A:ASP139 4.5 24.3 1.0
OD2 A:ASP139 4.5 25.6 1.0
CB A:ASP139 4.6 23.4 1.0
O A:GLY140 4.7 23.6 1.0
CG A:GLN155 4.9 19.3 1.0
O A:HOH192 4.9 29.0 1.0
O A:HOH219 5.0 40.5 1.0

Reference:

J.Badger, J.M.Sauder, J.M.Adams, S.Antonysamy, K.Bain, M.G.Bergseid, S.G.Buchanan, M.D.Buchanan, Y.Batiyenko, J.A.Christopher, S.Emtage, A.Eroshkina, I.Feil, E.B.Furlong, K.S.Gajiwala, X.Gao, D.He, J.Hendle, A.Huber, K.Hoda, P.Kearins, C.Kissinger, B.Laubert, H.A.Lewis, J.Lin, K.Loomis, D.Lorimer, G.Louie, M.Maletic, C.D.Marsh, I.Miller, J.Molinari, H.J.Muller-Dieckmann, J.M.Newman, B.W.Noland, B.Pagarigan, F.Park, T.S.Peat, K.W.Post, S.Radojicic, A.Ramos, R.Romero, M.E.Rutter, W.E.Sanderson, K.D.Schwinn, J.Tresser, J.Winhoven, T.A.Wright, L.Wu, J.Xu, T.J.Harris. Structural Analysis of A Set of Proteins Resulting From A Bacterial Genomics Project Proteins V. 60 787 2005.
ISSN: ISSN 0887-3585
PubMed: 16021622
DOI: 10.1002/PROT.20541
Page generated: Tue Aug 13 10:33:19 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy