Magnesium in PDB 1ox0: The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae

All present enzymatic activity of The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae:
2.3.1.41;

The structure of The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae, PDB code: 1ox0 was solved by A.C.Price, C.O.Rock, S.W.White, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 1.30
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	63.666, 89.973, 62.202, 90.00, 90.00, 90.00
R / Rfree (%)	13.8 / 16

The binding sites of Magnesium atom in the The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae (pdb code 1ox0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae, PDB code: 1ox0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:8.4 occ:1.00 OE1 A:GLU346 2.5 10.8 1.0 OD1 A:ASN301 2.6 9.1 1.0 O A:ASN392 2.6 8.7 1.0 OG A:SER391 2.7 9.5 1.0 O A:ASN301 2.8 8.6 1.0 O A:ALA302 2.8 9.9 1.0 C A:ALA302 3.4 9.0 1.0 CD A:GLU346 3.5 8.5 1.0 N A:ASN392 3.5 8.0 1.0 C A:ASN301 3.5 8.0 1.0 CG A:ASN301 3.6 8.2 1.0 C A:ASN392 3.6 7.9 1.0 CB A:GLU346 3.7 7.9 1.0 CB A:SER391 4.0 8.8 1.0 N A:HIS303 4.0 8.8 1.0 CG A:GLU346 4.0 9.0 1.0 CB A:ASN301 4.0 8.7 1.0 O A:HOH505 4.0 9.3 1.0 C A:SER391 4.0 7.8 1.0 CA A:ASN392 4.1 8.4 1.0 CA A:SER391 4.1 8.7 1.0 N A:ALA302 4.1 8.2 1.0 CA A:ALA302 4.3 9.0 1.0 CA A:HIS303 4.3 8.8 1.0 CA A:ASN301 4.4 8.3 1.0 OE2 A:GLU346 4.5 9.0 1.0 CG2 A:THR393 4.6 9.7 1.0 O A:HOH520 4.7 10.8 1.0 CB A:ASN392 4.7 8.4 1.0 N A:THR393 4.8 7.8 1.0 ND2 A:ASN301 4.8 9.0 1.0 NZ A:LYS332 4.8 8.8 1.0 O A:SER391 4.9 8.7 1.0

Magnesium binding site 2 out of 2 in the The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Crystal Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase II From Streptococcus Pneumoniae within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:16.8 occ:1.00 O A:HOH779 2.0 19.9 1.0 O A:HOH644 2.0 20.2 1.0 O A:HOH566 2.1 14.0 1.0 O A:HOH583 2.1 18.6 1.0 O A:HOH796 2.1 22.0 1.0 O A:HOH767 2.1 15.3 1.0 OD2 A:ASP56 3.8 16.2 1.0 O A:HOH676 4.3 24.5 1.0 OE1 A:GLU23 4.4 14.0 1.0 O A:HOH680 4.4 23.8 1.0 O A:HOH511 4.4 11.8 1.0 O A:HOH636 4.5 22.7 1.0 O A:ILE17 4.5 10.1 1.0 CA A:GLY18 4.6 8.8 1.0 O A:HOH801 4.6 23.7 1.0 C A:ILE17 4.7 8.5 1.0 N A:GLY18 4.8 8.3 1.0 CD A:GLU23 4.8 18.3 1.0 CG A:ASP56 4.8 13.3 1.0 O A:HOH688 5.0 24.1 1.0

A.C.Price, C.O.Rock, S.W.White. The 1.3-Angstrom-Resolution Crystal Structure of Beta-Ketoacyl-Acyl Carrier Protein Synthase II From Streptococcus Pneumoniae. J.Bacteriol. V. 185 4136 2003.
ISSN: ISSN 0021-9193
PubMed: 12837788
DOI: 10.1128/JB.185.14.4136-4143.2003