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Magnesium in PDB 1puj: Structure of B. Subtilis Ylqf Gtpase

Protein crystallography data

The structure of Structure of B. Subtilis Ylqf Gtpase, PDB code: 1puj was solved by R.Kniewel, J.Buglino, C.D.Lima, S.K.Burley, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.41 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.749, 68.568, 105.574, 90.00, 90.00, 90.00
R / Rfree (%) 21.6 / 25

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of B. Subtilis Ylqf Gtpase (pdb code 1puj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of B. Subtilis Ylqf Gtpase, PDB code: 1puj:

Magnesium binding site 1 out of 1 in 1puj

Go back to Magnesium Binding Sites List in 1puj
Magnesium binding site 1 out of 1 in the Structure of B. Subtilis Ylqf Gtpase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of B. Subtilis Ylqf Gtpase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg9001

b:47.6
occ:1.00
OG A:SER134 2.3 29.4 1.0
O A:HOH9036 2.4 29.1 1.0
O2B A:GNP501 2.5 24.4 1.0
O2G A:GNP501 2.6 30.9 1.0
O A:HOH9150 2.6 62.9 1.0
O A:HOH9108 2.9 28.1 1.0
CB A:SER134 3.2 24.8 1.0
PB A:GNP501 3.7 24.1 1.0
PG A:GNP501 3.8 26.4 1.0
N3B A:GNP501 3.9 27.2 1.0
N A:SER134 3.9 20.7 1.0
OD2 A:ASP171 4.0 47.8 1.0
CA A:SER134 4.0 23.7 1.0
O1B A:GNP501 4.7 23.9 1.0
O3G A:GNP501 4.7 28.9 1.0
OD1 A:ASP171 4.7 47.2 1.0
O1G A:GNP501 4.7 31.7 1.0
CG A:ASP171 4.8 46.3 1.0
CB A:LYS133 4.8 17.1 1.0
O2A A:GNP501 4.9 25.2 1.0
O3A A:GNP501 4.9 24.2 1.0
C A:LYS133 4.9 19.2 1.0

Reference:

R.Kniewel, J.Buglino, C.D.Lima. Structure of the Ylqf Gtpase From B. Subtilis To Be Published.
Page generated: Tue Aug 13 10:56:15 2024

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