Atomistry » Magnesium » PDB 1pi3-1q24 » 1pun
Atomistry »
  Magnesium »
    PDB 1pi3-1q24 »
      1pun »

Magnesium in PDB 1pun: Solution Structure of the Mutt Pyrophosphohydrolase Complexed with Mg(2+) and 8-Oxo-Dgmp, A Tightly-Bound Product

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Solution Structure of the Mutt Pyrophosphohydrolase Complexed with Mg(2+) and 8-Oxo-Dgmp, A Tightly-Bound Product (pdb code 1pun). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Solution Structure of the Mutt Pyrophosphohydrolase Complexed with Mg(2+) and 8-Oxo-Dgmp, A Tightly-Bound Product, PDB code: 1pun:

Magnesium binding site 1 out of 1 in 1pun

Go back to Magnesium Binding Sites List in 1pun
Magnesium binding site 1 out of 1 in the Solution Structure of the Mutt Pyrophosphohydrolase Complexed with Mg(2+) and 8-Oxo-Dgmp, A Tightly-Bound Product


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Solution Structure of the Mutt Pyrophosphohydrolase Complexed with Mg(2+) and 8-Oxo-Dgmp, A Tightly-Bound Product within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg130

b:0.0
occ:1.00
O A:HOH5012 2.1 0.0 1.0
O A:HOH5011 2.1 0.0 1.0
OE1 A:GLU56 2.2 0.0 1.0
O A:GLY38 2.3 0.0 1.0
OE1 A:GLU53 2.4 0.0 1.0
OE2 A:GLU57 2.4 0.0 1.0
HB3 A:LYS39 2.5 0.4 1.0
H2 A:HOH5014 2.8 0.4 1.0
H1 A:HOH5014 2.8 0.4 1.0
H2 A:HOH5013 2.8 0.4 1.0
H1 A:HOH5013 2.8 0.4 1.0
CD A:GLU56 3.3 0.0 1.0
CB A:LYS39 3.5 0.0 1.0
C A:GLY38 3.5 0.0 1.0
HB2 A:LYS39 3.6 0.4 1.0
CD A:GLU53 3.6 0.0 1.0
CD A:GLU57 3.6 0.0 1.0
OE2 A:GLU56 3.8 0.0 1.0
HB3 A:GLU56 3.8 0.4 1.0
H A:GLY38 4.0 0.4 1.0
HG2 A:GLU57 4.0 0.4 1.0
HB3 A:GLU53 4.1 0.4 1.0
HG2 A:LYS39 4.2 0.4 1.0
HG3 A:GLU53 4.3 0.4 1.0
CG A:LYS39 4.4 0.0 1.0
CG A:GLU57 4.4 0.0 1.0
CG A:GLU53 4.4 0.0 1.0
N A:LYS39 4.4 0.0 1.0
HA A:GLU53 4.5 0.4 1.0
CA A:LYS39 4.5 0.0 1.0
CA A:GLY38 4.5 0.0 1.0
OE2 A:GLU53 4.5 0.0 1.0
HD3 A:LYS39 4.5 0.4 1.0
HA3 A:GLY38 4.5 0.4 1.0
OE1 A:GLU57 4.6 0.0 1.0
CG A:GLU56 4.6 0.0 1.0
N A:GLY38 4.6 0.0 1.0
HD2 A:LYS39 4.6 0.4 1.0
CB A:GLU56 4.7 0.0 1.0
CB A:GLU53 4.7 0.0 1.0
HG3 A:GLU57 4.8 0.4 1.0
CD A:LYS39 4.8 0.0 1.0
C A:LYS39 5.0 0.0 1.0

Reference:

M.A.Massiah, V.Saraswat, H.F.Azurmendi, A.S.Mildvan. Solution Structure and Nh Exchange Studies of the Mutt Pyrophosphohydrolase Complexed with Mg(2+) and 8-Oxo-Dgmp, A Tightly Bound Product. Biochemistry V. 42 10140 2003.
ISSN: ISSN 0006-2960
PubMed: 12939141
DOI: 10.1021/BI030105P
Page generated: Tue Aug 13 10:56:24 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy