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Magnesium in PDB 1qb8: Crystal Structures of Adenine Phosphoribosyltransferase From Leishmania Donovani

Protein crystallography data

The structure of Crystal Structures of Adenine Phosphoribosyltransferase From Leishmania Donovani, PDB code: 1qb8 was solved by C.P.Hill, C.L.Phillips, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.00 / 2.00
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 64.040, 64.040, 235.950, 90.00, 90.00, 120.00
R / Rfree (%) 19.6 / 26.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structures of Adenine Phosphoribosyltransferase From Leishmania Donovani (pdb code 1qb8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structures of Adenine Phosphoribosyltransferase From Leishmania Donovani, PDB code: 1qb8:

Magnesium binding site 1 out of 1 in 1qb8

Go back to Magnesium Binding Sites List in 1qb8
Magnesium binding site 1 out of 1 in the Crystal Structures of Adenine Phosphoribosyltransferase From Leishmania Donovani


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structures of Adenine Phosphoribosyltransferase From Leishmania Donovani within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg335

b:42.2
occ:1.00
OD1 A:ASP146 2.7 16.3 1.0
O4 A:CIT325 2.8 55.2 1.0
O A:HOH396 2.8 31.5 1.0
O3' A:AMP300 2.9 52.0 1.0
C5 A:CIT325 3.2 58.2 1.0
CG2 A:THR154 3.5 17.3 1.0
C4' A:AMP300 3.6 42.5 1.0
CG A:ASP146 3.6 16.4 1.0
OG1 A:THR154 3.7 23.7 1.0
C3' A:AMP300 3.8 45.0 1.0
OD2 A:ASP146 3.9 17.0 1.0
C4 A:CIT325 3.9 57.5 1.0
O A:ASP80 3.9 19.8 1.0
O3 A:CIT325 4.0 57.9 1.0
CB A:THR154 4.0 18.6 1.0
CB A:PHE79 4.0 14.2 1.0
O7 A:CIT325 4.1 57.7 1.0
C5' A:AMP300 4.1 39.4 1.0
O2' A:AMP300 4.5 47.8 1.0
CD2 A:PHE79 4.5 15.5 1.0
C3 A:CIT325 4.6 54.6 1.0
O A:HOH353 4.7 21.0 1.0
CG A:PHE79 4.8 15.4 1.0
C2' A:AMP300 4.8 45.1 1.0
O4' A:AMP300 4.8 41.6 1.0
C A:ASP80 4.8 18.5 1.0
CB A:ASP146 4.9 12.8 1.0

Reference:

C.L.Phillips, B.Ullman, R.G.Brennan, C.P.Hill. Crystal Structures of Adenine Phosphoribosyltransferase From Leishmania Donovani. Embo J. V. 18 3533 1999.
ISSN: ISSN 0261-4189
PubMed: 10393170
DOI: 10.1093/EMBOJ/18.13.3533
Page generated: Tue Aug 13 11:16:31 2024

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