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Magnesium in the structure of Udp-Manganese Complex of Spsa From Bacillus Subtilis (pdb 1qgq)

The binding sites of Magnesium atom in the structure of Udp-Manganese Complex of Spsa From Bacillus Subtilis (pdb code 1qgq). This binding sites where shown with 5.0 Angstroms radius around Magnesium atom.
The 1qgq structure was solved by S.J.CHARNOCK, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)20.0-1.5
Space groupC2221
a (A)47.330
b (A)142.360
c (A)81.240
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)16
Rfree (%)21

Magnesium Binding Sites:

Magnesium binding site 1 out of 1 in 1qgq

Magnesium binding site 1 out of 1 in 1qgq
Click to enlarge
stereopicture of Magnesium binding site 1 out of 1 in 1qgq
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Magnesium in the PDB 1qgq. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Magnesium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp158, A: Arg188, A: Asp191, A: Udp311, A: Gol310, A: Hoh434, A: Hoh487, A: Hoh491, A: Hoh567, A: Hoh580,

conact list:

AtomAtomDistance (A)
MgOD1 A:Asp1584.12
MgO A:Arg1884.36
MgOD2 A:Asp1914.25
MgOD1 A:Asp1914.35
MgCG A:Asp1914.67
MgO3B A:Udp3114.46
MgO1B A:Udp3112.71
MgPB A:Udp3114.15
MgO2B A:Udp3114.75
MgO2 A:Gol3102.37
MgC1 A:Gol3104.56
MgO1 A:Gol3104.56
MgC3 A:Gol3104.08
MgO3 A:Gol3104.42
MgC2 A:Gol3103.32
MgO A:Hoh4342.26
MgO A:Hoh4872.18
MgO A:Hoh4914.39
MgO A:Hoh5672.21
MgO A:Hoh5803.16

interactive model:

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