Atomistry » Magnesium » PDB 1qc5-1qsh » 1qpg
Atomistry »
  Magnesium »
    PDB 1qc5-1qsh »
      1qpg »

Magnesium in PDB 1qpg: 3-Phosphoglycerate Kinase, Mutation R65Q

Enzymatic activity of 3-Phosphoglycerate Kinase, Mutation R65Q

All present enzymatic activity of 3-Phosphoglycerate Kinase, Mutation R65Q:
2.7.2.3;

Protein crystallography data

The structure of 3-Phosphoglycerate Kinase, Mutation R65Q, PDB code: 1qpg was solved by T.M.Mcphillips, B.T.Hsu, M.A.Sherman, M.T.Mas, D.C.Rees, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.40
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 96.000, 70.100, 82.300, 90.00, 122.20, 90.00
R / Rfree (%) 18.5 / n/a

Magnesium Binding Sites:

The binding sites of Magnesium atom in the 3-Phosphoglycerate Kinase, Mutation R65Q (pdb code 1qpg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the 3-Phosphoglycerate Kinase, Mutation R65Q, PDB code: 1qpg:

Magnesium binding site 1 out of 1 in 1qpg

Go back to Magnesium Binding Sites List in 1qpg
Magnesium binding site 1 out of 1 in the 3-Phosphoglycerate Kinase, Mutation R65Q


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of 3-Phosphoglycerate Kinase, Mutation R65Q within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg450

b:40.5
occ:1.00
MG A:MAP450 0.0 40.5 1.0
O2A A:MAP450 2.2 46.8 1.0
O1G A:MAP450 2.4 44.5 1.0
O1B A:MAP450 2.5 43.6 1.0
PA A:MAP450 3.2 41.1 1.0
PG A:MAP450 3.3 46.8 1.0
PB A:MAP450 3.4 42.0 1.0
O3A A:MAP450 3.5 36.5 1.0
O2G A:MAP450 3.6 53.2 1.0
OD2 A:ASP372 3.7 46.0 1.0
N3B A:MAP450 3.7 44.8 1.0
O1A A:MAP450 4.2 35.5 1.0
O5' A:MAP450 4.3 42.7 1.0
O3G A:MAP450 4.7 53.1 1.0
N A:ASP372 4.7 37.4 1.0
CG A:ASP372 4.7 45.8 1.0
O2B A:MAP450 4.7 31.5 1.0
N A:GLY371 4.8 38.7 1.0
CA A:GLY371 4.8 35.5 1.0
C5' A:MAP450 5.0 39.0 1.0

Reference:

T.M.Mcphillips, B.T.Hsu, M.A.Sherman, M.T.Mas, D.C.Rees. Structure of the R65Q Mutant of Yeast 3-Phosphoglycerate Kinase Complexed with Mg-Amp-Pnp and 3-Phospho-D-Glycerate. Biochemistry V. 35 4118 1996.
ISSN: ISSN 0006-2960
PubMed: 8672447
DOI: 10.1021/BI952500O
Page generated: Tue Aug 13 11:54:13 2024

Last articles

W in 8QLN
W in 8RJA
V in 8WTN
Te in 8QLN
Re in 9GHX
Rb in 8Z5C
Ni in 9C0T
Ni in 9C0S
Ni in 9GP1
Ni in 9FYO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy