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Magnesium in PDB 1r4x: Crystal Structure Analys of the Gamma-Copi Appendage Domain

Protein crystallography data

The structure of Crystal Structure Analys of the Gamma-Copi Appendage Domain, PDB code: 1r4x was solved by P.J.Watson, G.Frigerio, B.M.Collins, R.Duden, D.J.Owen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.800, 74.100, 99.200, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 20.8

Other elements in 1r4x:

The structure of Crystal Structure Analys of the Gamma-Copi Appendage Domain also contains other interesting chemical elements:

Arsenic (As) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure Analys of the Gamma-Copi Appendage Domain (pdb code 1r4x). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure Analys of the Gamma-Copi Appendage Domain, PDB code: 1r4x:

Magnesium binding site 1 out of 1 in 1r4x

Go back to Magnesium Binding Sites List in 1r4x
Magnesium binding site 1 out of 1 in the Crystal Structure Analys of the Gamma-Copi Appendage Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analys of the Gamma-Copi Appendage Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg875

b:30.2
occ:1.00
O A:HOH115 2.0 25.9 1.0
O A:HOH243 2.1 22.4 1.0
O A:HOH141 2.1 25.9 1.0
O A:HOH114 2.1 27.5 1.0
OD2 A:ASP671 2.1 21.4 1.0
O A:HOH77 2.2 27.5 1.0
CG A:ASP671 3.1 19.2 1.0
OD1 A:ASP671 3.4 22.2 1.0
O A:HOH95 4.1 24.2 1.0
O A:HOH26 4.3 22.1 1.0
CB A:ASP671 4.5 17.8 1.0

Reference:

P.J.Watson, G.Frigerio, B.M.Collins, R.Duden, D.J.Owen. Gamma-Cop Appendage Domain - Structure and Function Traffic V. 5 79 2004.
ISSN: ISSN 1398-9219
PubMed: 14690497
DOI: 10.1111/J.1600-0854.2004.00158.X
Page generated: Tue Aug 13 12:03:30 2024

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