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Magnesium in PDB 1rvk: Crystal Structure of Enolase AGR_L_2751 From Agrobacterium Tumefaciens

Protein crystallography data

The structure of Crystal Structure of Enolase AGR_L_2751 From Agrobacterium Tumefaciens, PDB code: 1rvk was solved by A.A.Fedorov, E.V.Fedorov, R.Thirumuruhan, W.Zencheck, C.Millikin, J.A.Gerlt, S.C.Almo, S.K.Burley, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.70
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 118.733, 118.733, 133.199, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 21.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Enolase AGR_L_2751 From Agrobacterium Tumefaciens (pdb code 1rvk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Enolase AGR_L_2751 From Agrobacterium Tumefaciens, PDB code: 1rvk:

Magnesium binding site 1 out of 1 in 1rvk

Go back to Magnesium Binding Sites List in 1rvk
Magnesium binding site 1 out of 1 in the Crystal Structure of Enolase AGR_L_2751 From Agrobacterium Tumefaciens


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Enolase AGR_L_2751 From Agrobacterium Tumefaciens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg999

b:14.5
occ:1.00
OE1 A:GLU258 2.1 11.6 1.0
OD1 A:ASP206 2.1 11.3 1.0
OE2 A:GLU232 2.2 12.9 1.0
O A:HOH419 2.2 11.5 1.0
O A:HOH455 2.3 14.2 1.0
O A:HOH436 2.3 15.2 1.0
CD A:GLU258 3.0 14.2 1.0
CG A:ASP206 3.1 13.8 1.0
CD A:GLU232 3.3 13.0 1.0
OE2 A:GLU258 3.3 12.8 1.0
OD2 A:ASP206 3.6 13.6 1.0
CG A:GLU232 3.9 10.2 1.0
NH1 A:ARG280 4.1 12.9 1.0
NE2 A:HIS171 4.1 14.0 1.0
NZ A:LYS169 4.1 9.8 1.0
OE1 A:GLU232 4.2 12.0 1.0
NE A:ARG280 4.2 11.1 1.0
O A:HOH631 4.3 21.1 1.0
CB A:ASP206 4.3 11.6 1.0
CG A:GLU258 4.3 11.8 1.0
OE2 A:GLU233 4.4 12.8 1.0
O A:HOH524 4.4 24.9 1.0
CD2 A:HIS309 4.5 14.9 1.0
CB A:GLU258 4.6 13.7 1.0
CZ A:ARG280 4.6 12.9 1.0
CE1 A:HIS209 4.7 16.0 1.0
CD2 A:HIS171 4.8 16.9 1.0
NE2 A:HIS309 4.9 14.9 1.0
CE A:LYS169 4.9 8.4 1.0

Reference:

A.A.Fedorov, E.V.Fedorov, R.Thirumuruhan, W.Zencheck, C.Millikin, J.A.Gerlt, S.C.Almo. Evolution of Enzymatic Activites in the Enolase Superfamily: 1.7 A Crystal Structure of the Hypothetical Protein Mr.Gi-17937161 From Agrobacterium Tumefaciens To Be Published.
Page generated: Tue Aug 13 13:08:56 2024

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