Magnesium in PDB 1t5c: Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E

The structure of Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E, PDB code: 1t5c was solved by I.Garcia-Saez, T.Yen, R.H.Wade, F.Kozielski, Structuralproteomics In Europe (Spine), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	12.00 / 2.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	49.353, 83.700, 94.162, 90.00, 103.05, 90.00
R / Rfree (%)	22.8 / 27.8

The binding sites of Magnesium atom in the Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E (pdb code 1t5c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E, PDB code: 1t5c:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:37.1 occ:1.00 O A:HOH660 2.3 42.8 1.0 O2B A:ADP600 2.4 38.3 1.0 O A:HOH617 2.4 30.1 1.0 OG1 A:THR93 2.4 39.1 1.0 O A:HOH637 2.5 30.8 1.0 CB A:THR93 3.3 37.6 1.0 O3B A:ADP600 3.4 30.3 1.0 PB A:ADP600 3.5 34.0 1.0 O2A A:ADP600 4.1 22.0 1.0 N A:THR93 4.3 30.5 1.0 O A:HOH605 4.3 29.3 1.0 CG2 A:THR93 4.3 19.8 1.0 OD2 A:ASP235 4.3 33.5 1.0 CA A:THR93 4.4 30.2 1.0 O1B A:ADP600 4.4 27.8 1.0 O3A A:ADP600 4.5 40.1 1.0 OD1 A:ASP235 4.6 44.0 1.0 PA A:ADP600 4.8 38.2 1.0 CG A:ASP235 4.9 26.1 1.0 O1A A:ADP600 5.0 24.8 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Motor Domain of Human Kinetochore Protein Cenp-E within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg702 b:57.5 occ:1.00 OG1 B:THR93 2.7 73.9 1.0 O2B B:ADP700 2.8 86.7 1.0 O B:HOH705 3.0 41.1 1.0 O3B B:ADP700 3.2 86.2 1.0 PB B:ADP700 3.5 79.0 1.0 O2A B:ADP700 3.6 97.0 1.0 CB B:THR93 3.9 79.6 1.0 O3A B:ADP700 4.2 80.8 1.0 OG B:SER200 4.5 0.6 1.0 PA B:ADP700 4.5 89.8 1.0 CG2 B:THR93 4.7 79.7 1.0 O1B B:ADP700 4.8 89.2 1.0 N B:THR93 4.8 65.8 1.0

I.Garcia-Saez, T.Yen, R.H.Wade, F.Kozielski. Crystal Structure of the Motor Domain of the Human Kinetochore Protein Cenp-E. J.Mol.Biol. V. 340 1107 2004.
ISSN: ISSN 0022-2836
PubMed: 15236970
DOI: 10.1016/J.JMB.2004.05.053