Magnesium in PDB 1tpz: Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases

The structure of Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases, PDB code: 1tpz was solved by A.Ghosh, R.Uthaiah, J.Howard, C.Herrmann, E.Wolf, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	80.540, 91.890, 143.470, 90.00, 90.00, 90.00
R / Rfree (%)	20.8 / 24.1

The binding sites of Magnesium atom in the Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases (pdb code 1tpz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases, PDB code: 1tpz:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1501 b:29.5 occ:1.00 O A:HOH1709 2.1 33.3 1.0 O3B A:GDP1500 2.1 34.8 1.0 O A:HOH1710 2.3 32.4 1.0 OG A:SER83 2.3 29.6 1.0 O A:HOH1711 2.3 33.4 1.0 O A:HOH1712 2.4 30.3 1.0 PB A:GDP1500 3.3 37.3 1.0 CB A:SER83 3.3 29.9 1.0 O1B A:GDP1500 3.5 44.6 1.0 OD2 A:ASP126 3.8 33.9 1.0 O2A A:GDP1500 3.9 41.3 1.0 N A:SER83 4.0 30.5 1.0 O A:HOH1573 4.1 36.5 1.0 O A:LYS101 4.1 39.1 1.0 OD1 A:ASP126 4.2 32.7 1.0 CA A:SER83 4.2 29.3 1.0 O2B A:GDP1500 4.3 37.0 1.0 O A:HOH1726 4.3 53.1 1.0 O3A A:GDP1500 4.4 38.5 1.0 CG A:ASP126 4.4 31.8 1.0 CB A:VAL104 4.6 39.7 1.0 O A:VAL104 4.6 44.5 1.0 PA A:GDP1500 4.6 41.4 1.0 O A:HOH1579 4.7 36.1 1.0 O A:HOH1641 4.9 37.8 1.0 CE A:LYS82 4.9 29.1 1.0 CB A:LYS82 4.9 31.8 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of IIGP1: A Paradigm For Interferon Inducible P47 Resistance Gtpases within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg2501 b:26.5 occ:1.00 O B:HOH2693 1.5 25.6 1.0 O3B B:GDP2500 1.8 53.5 1.0 OG B:SER83 2.3 35.8 1.0 O B:HOH2635 2.4 39.0 1.0 O B:HOH2666 2.4 37.1 1.0 O B:HOH2592 2.5 35.6 1.0 PB B:GDP2500 2.9 49.4 1.0 CB B:SER83 3.2 37.8 1.0 O1B B:GDP2500 3.3 54.8 1.0 O2A B:GDP2500 3.5 39.6 1.0 N B:SER83 3.6 37.6 1.0 O3A B:GDP2500 3.9 50.1 1.0 CA B:SER83 4.0 37.1 1.0 O2B B:GDP2500 4.0 52.9 1.0 OD2 B:ASP126 4.1 45.2 1.0 PA B:GDP2500 4.1 46.9 1.0 OD1 B:ASP126 4.3 39.8 1.0 O B:LYS101 4.4 49.3 1.0 CB B:LYS82 4.5 35.4 1.0 O1A B:GDP2500 4.5 47.1 1.0 O B:VAL104 4.5 67.4 1.0 O B:HOH2509 4.6 48.3 1.0 CG B:ASP126 4.6 41.5 1.0 CE B:LYS82 4.6 43.5 1.0 O B:HOH2660 4.7 45.7 1.0 C B:LYS82 4.7 38.1 1.0 NZ B:LYS82 4.9 49.3 1.0 CB B:VAL104 5.0 66.7 1.0 CA B:LYS82 5.0 38.4 1.0

A.Ghosh, R.Uthaiah, J.Howard, C.Herrmann, E.Wolf. Crystal Structure of IIGP1; A Paradigm For Interferon-Inducible P47 Resistance Gtpases Mol.Cell V. 15 727 2004.
ISSN: ISSN 1097-2765
PubMed: 15350217
DOI: 10.1016/J.MOLCEL.2004.07.017