Magnesium in PDB 1tzz: Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum

The structure of Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum, PDB code: 1tzz was solved by A.A.Fedorov, E.V.Fedorov, W.S.Yew, J.A.Gerlt, S.C.Almo, S.K.Burley, New York Sgx Research Center For Structuralgenomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.86
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	95.975, 178.003, 110.519, 90.00, 90.00, 90.00
R / Rfree (%)	23.4 / 25.4

The binding sites of Magnesium atom in the Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum (pdb code 1tzz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum, PDB code: 1tzz:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg3501 b:25.9 occ:1.00 O A:HOH3322 2.0 21.9 1.0 OE2 A:GLU1242 2.1 21.1 1.0 O A:HOH3324 2.1 35.0 1.0 O A:HOH3323 2.1 33.8 1.0 OD2 A:ASP1216 2.2 19.6 1.0 OE1 A:GLU1268 2.2 22.3 1.0 CG A:ASP1216 3.1 21.1 1.0 CD A:GLU1242 3.1 19.4 1.0 CD A:GLU1268 3.3 23.3 1.0 OD1 A:ASP1216 3.3 20.2 1.0 O A:HOH3003 3.6 32.2 1.0 OE2 A:GLU1268 3.7 22.1 1.0 O A:HOH3128 3.8 23.9 1.0 NZ A:LYS1185 3.9 23.4 1.0 CG A:GLU1242 3.9 19.3 1.0 OE1 A:GLU1242 4.0 19.5 1.0 OD1 A:ASN1218 4.1 32.0 1.0 O A:HOH3055 4.1 19.1 1.0 O A:HOH3223 4.3 35.8 1.0 CB A:ASP1216 4.4 19.9 1.0 OE1 A:GLU1243 4.5 23.1 1.0 O A:HOH3142 4.5 32.8 1.0 CG A:GLU1268 4.5 19.4 1.0 CE A:LYS1185 4.8 22.6 1.0 OE1 A:GLN1293 5.0 18.4 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg3502 b:22.8 occ:1.00 O B:HOH3002 2.0 18.3 1.0 O B:HOH3321 2.1 27.0 1.0 OE2 B:GLU2242 2.1 17.7 1.0 OD2 B:ASP2216 2.2 18.2 1.0 OE1 B:GLU2268 2.2 18.1 1.0 O B:HOH3172 2.2 26.8 1.0 CG B:ASP2216 3.0 19.4 1.0 CD B:GLU2242 3.1 18.0 1.0 CD B:GLU2268 3.2 20.0 1.0 OD1 B:ASP2216 3.3 17.4 1.0 OE2 B:GLU2268 3.5 21.8 1.0 NZ B:LYS2185 3.7 17.8 1.0 O B:HOH3177 3.8 27.4 1.0 OE1 B:GLU2242 3.9 16.4 1.0 CG B:GLU2242 3.9 16.4 1.0 O B:HOH3045 3.9 19.9 1.0 OD1 B:ASN2218 4.1 22.5 1.0 O B:HOH3022 4.2 16.5 1.0 O B:HOH3184 4.2 25.6 1.0 OE1 B:GLU2243 4.4 22.6 1.0 CB B:ASP2216 4.4 17.9 1.0 CG B:GLU2268 4.5 16.1 1.0 CE B:LYS2185 4.7 18.7 1.0 CG B:ASN2218 4.8 21.6 1.0 O B:HOH3179 4.9 31.6 1.0

A.A.Fedorov, E.V.Fedorov, W.S.Yew, J.A.Gerlt, S.C.Almo. Crystal Structure of the Protein L1841, Unknown Member of Enolase Superfamily From Bradyrhizobium Japonicum To Be Published.