Magnesium in PDB 1ue3: Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt

The structure of Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt, PDB code: 1ue3 was solved by T.Sunami, J.Kondo, I.Hirao, K.Watanabe, K.Miura, A.Takenaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 2.15
Space group	P 63 2 2
Cell size a, b, c (Å), α, β, γ (°)	37.373, 37.373, 64.587, 90.00, 90.00, 120.00
R / Rfree (%)	22.7 / 23.9

The structure of Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt also contains other interesting chemical elements:

Cobalt	(Co)	1 atom
Chlorine	(Cl)	1 atom

The binding sites of Magnesium atom in the Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt (pdb code 1ue3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt, PDB code: 1ue3:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg767 b:58.7 occ:1.00 O A:HOH772 2.1 60.0 1.0 O A:HOH771 2.1 58.8 1.0 O A:HOH773 2.1 58.5 1.0 O A:HOH774 2.1 59.2 1.0 O A:HOH770 2.1 60.0 1.0 O A:HOH769 2.1 58.8 1.0 O A:HOH805 3.8 73.2 1.0 O A:HOH790 4.1 41.5 1.0 O6 A:DG7 4.1 27.8 1.0 N7 A:DG7 4.2 27.9 1.0 O A:HOH788 4.4 41.5 1.0 C6 A:DG7 4.9 27.8 1.0 C5 A:DG7 5.0 28.6 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of D(Gcgaaagc) Containing Hexaamminecobalt within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg768 b:74.8 occ:0.33 O A:HOH776 2.1 74.7 0.3 O A:HOH779 2.1 74.5 0.3 O A:HOH780 2.1 74.8 0.3 O A:HOH777 2.1 74.5 0.3 O A:HOH775 2.1 74.7 0.3 O A:HOH778 2.1 74.5 0.3 OP1 A:DG7 4.5 42.6 1.0 OP2 A:DG7 4.8 40.7 1.0

T.Sunami, J.Kondo, I.Hirao, K.Watanabe, K.I.Miura, A.Takenaka. Structure of D(Gcgaaagc) (Hexagonal Form): A Base-Intercalated Duplex As A Stable Structure. Acta Crystallogr.,Sect.D V. 60 90 2004.
ISSN: ISSN 0907-4449
PubMed: 14684897
DOI: 10.1107/S0907444903024703