Magnesium in the structure of Complex Between Dictyostelium Myosin And Mgadp and Vanadate At 1.9A Resolution (pdb 1vom)

The binding sites of Magnesium atom in the structure of Complex Between Dictyostelium Myosin And Mgadp and Vanadate At 1.9A Resolution (pdb code 1vom). This binding sites where shown with 5.0 Angstroms radius around Magnesium atom. The 1vom structure was solved by I.RAYMENT, C.A.SMITH, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 30.0-1.9 Space group P21212 a (A) 84.500 b (A) 145.400 c (A) 153.800 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.4 Rfree (%) n/a Magnesium Binding Sites: Magnesium binding site 1 out of 1 in 1vom Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Magnesium in the PDB 1vom. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Magnesium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Lys185, A: Thr186, A: Asn227, A: Asn233, A: Asn235, A: Ser236, A: Ser237, A: Asp454, A: Ile455, A: Vo4998, A: Adp999, A: Hoh1036, A: Hoh1054, A: Hoh1694, A: Hoh1695, conact list: Atom Atom Distance (A) Mg CB A:Lys185 5.00 Mg CE A:Lys185 4.94 Mg N A:Thr186 3.90 Mg CB A:Thr186 3.00 Mg CG2 A:Thr186 4.05 Mg OG1 A:Thr186 2.00 Mg CA A:Thr186 4.02 Mg ND2 A:Asn227 4.76 Mg ND2 A:Asn233 4.85 Mg O A:Asn235 4.63 Mg C A:Ser236 4.83 Mg N A:Ser237 3.73 Mg CB A:Ser237 3.01 Mg OG A:Ser237 2.12 Mg CA A:Ser237 3.97 Mg OD2 A:Asp454 4.16 Mg OD1 A:Asp454 3.95 Mg CG A:Asp454 4.48 Mg O A:Ile455 4.60 Mg O1 A:Vo4998 1.88 Mg O2 A:Vo4998 4.71 Mg O4 A:Vo4998 4.69 Mg O3 A:Vo4998 4.43 Mg V A:Vo4998 3.40 Mg O3B A:Adp999 3.65 Mg PA A:Adp999 4.59 Mg O2A A:Adp999 4.13 Mg O1B A:Adp999 2.19 Mg PB A:Adp999 3.38 Mg O2B A:Adp999 4.46 Mg O3A A:Adp999 4.32 Mg O1A A:Adp999 4.69 Mg O A:Hoh1036 4.98 Mg O A:Hoh1054 4.27 Mg O A:Hoh1694 2.04 Mg O A:Hoh1695 2.06 interactive model: