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Magnesium in PDB 1w5a: Ftsz Dimer, Mggtp Soak (M. Jannaschii)

Protein crystallography data

The structure of Ftsz Dimer, Mggtp Soak (M. Jannaschii), PDB code: 1w5a was solved by M.A.Oliva, S.C.Cordell, J.Lowe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 70.436, 55.222, 88.127, 90.00, 91.33, 90.00
R / Rfree (%) 21.8 / 26.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ftsz Dimer, Mggtp Soak (M. Jannaschii) (pdb code 1w5a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Ftsz Dimer, Mggtp Soak (M. Jannaschii), PDB code: 1w5a:

Magnesium binding site 1 out of 1 in 1w5a

Go back to Magnesium Binding Sites List in 1w5a
Magnesium binding site 1 out of 1 in the Ftsz Dimer, Mggtp Soak (M. Jannaschii)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ftsz Dimer, Mggtp Soak (M. Jannaschii) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:39.3
occ:1.00
O A:HOH2015 2.0 38.0 1.0
O A:HOH2016 2.1 29.0 1.0
O2G A:GTP500 2.3 31.3 1.0
O A:HOH2139 2.3 20.4 1.0
O1B A:GTP500 2.8 26.2 1.0
OE1 A:GLN75 2.9 29.2 1.0
O3G A:GTP500 3.1 28.2 1.0
PG A:GTP500 3.2 24.1 1.0
CD A:GLN75 3.7 32.4 1.0
O B:HOH2064 3.8 45.5 1.0
O3B A:GTP500 3.8 26.1 1.0
PB A:GTP500 3.8 25.5 1.0
O A:HOH2029 3.9 54.0 1.0
NE2 A:GLN75 4.0 31.4 1.0
CB A:ASP72 4.1 28.9 1.0
OD2 A:ASP72 4.1 30.2 1.0
ND2 A:ASN70 4.2 20.4 1.0
CA A:GLY96 4.3 27.1 1.0
O3A A:GTP500 4.5 26.9 1.0
OG1 A:THR135 4.5 32.1 1.0
OD1 A:ASN70 4.5 24.7 1.0
O1G A:GTP500 4.6 30.0 1.0
CG A:ASP72 4.6 31.6 1.0
N A:GLY47 4.7 28.3 1.0
CG A:GLN75 4.8 30.7 1.0
CG A:ASN70 4.9 20.5 1.0
O1A A:GTP500 4.9 28.1 1.0
N A:ALA97 5.0 29.5 1.0

Reference:

M.A.Oliva, S.C.Cordell, J.Lowe. Structural Insights Into Ftsz Protofilament Formation Nat.Struct.Mol.Biol. V. 11 1243 2004.
ISSN: ISSN 1545-9993
PubMed: 15558053
DOI: 10.1038/NSMB855
Page generated: Mon Dec 14 07:01:22 2020

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