Magnesium in PDB 1wkl: Crystal Structure of Nucleoside Diphosphate Kinase From Thermus Thermophilus HB8 in Complex with Atp and Adp

Enzymatic activity of Crystal Structure of Nucleoside Diphosphate Kinase From Thermus Thermophilus HB8 in Complex with Atp and Adp

Protein crystallography data

Magnesium Binding Sites:

Magnesium binding site 1 out of 1 in 1wkl

Magnesium Binding Sites List in 1wkl

Magnesium binding site 1 out of 1 in the Crystal Structure of Nucleoside Diphosphate Kinase From Thermus Thermophilus HB8 in Complex with Atp and Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Nucleoside Diphosphate Kinase From Thermus Thermophilus HB8 in Complex with Atp and Adp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg900 b:38.4 occ:1.00 O3G B:ATP856 1.8 43.8 0.3 N B:GLY116 2.8 22.9 1.0 O B:GLY116 3.1 23.1 1.0 NH2 B:ARG85 3.1 38.3 1.0 PG B:ATP856 3.3 43.9 0.3 CE B:MET88 3.3 19.2 1.0 ND1 B:HIS115 3.5 27.2 1.0 O2B B:ATP856 3.5 45.5 0.3 CA B:HIS115 3.5 21.3 1.0 NH2 B:ARG102 3.6 30.3 1.0 C B:HIS115 3.6 22.3 1.0 O3B B:ATP856 3.7 44.3 0.3 CA B:GLY116 3.8 20.2 1.0 C B:GLY116 3.8 21.7 1.0 NH1 B:ARG102 3.9 33.7 1.0 O1G B:ATP856 4.0 43.2 0.3 PB B:ATP856 4.0 44.8 0.3 SD B:MET88 4.1 23.1 1.0 CG B:HIS115 4.1 25.2 1.0 CE1 B:HIS115 4.2 26.7 1.0 CZ B:ARG85 4.2 41.1 1.0 CZ B:ARG102 4.2 32.0 1.0 CB B:HIS115 4.2 22.8 1.0 O2G B:ATP856 4.3 43.5 0.3 O1B B:ATP856 4.4 45.6 0.3 O B:ILE114 4.5 19.7 1.0 N B:HIS115 4.7 20.3 1.0 O B:HIS115 4.8 23.6 1.0 CD B:ARG85 4.9 35.2 1.0 NE B:ARG85 4.9 38.3 1.0 NH1 B:ARG85 4.9 40.3 1.0 C B:ILE114 5.0 20.6 1.0

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