Magnesium in PDB 1wuf: Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262

The structure of Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262, PDB code: 1wuf was solved by A.A.Fedorov, E.V.Fedorov, W.S.Yew, J.A.Gerlt, S.C.Almo, S.K.Burley, Newyork Sgx Research Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.00 / 2.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	54.721, 87.346, 161.489, 90.00, 90.00, 90.00
R / Rfree (%)	23.6 / 27.4

The binding sites of Magnesium atom in the Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262 (pdb code 1wuf). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262, PDB code: 1wuf:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg5001 b:65.1 occ:1.00 OD1 A:ASP1239 2.5 33.1 1.0 OE1 A:GLU1214 2.5 34.4 1.0 OE1 A:GLU1240 3.2 30.1 1.0 OE2 A:GLU1240 3.5 28.3 1.0 CG A:ASP1239 3.5 32.4 1.0 CD A:GLU1214 3.5 34.8 1.0 CD A:GLU1240 3.7 28.5 1.0 CB A:ASP1239 3.8 32.0 1.0 OD1 A:ASN1191 3.8 69.5 1.0 OD1 A:ASP1189 4.1 54.0 1.0 CG A:GLU1214 4.1 34.5 1.0 OD2 A:ASP1189 4.3 54.4 1.0 OE2 A:GLU1214 4.5 31.5 1.0 CG A:ASP1189 4.6 48.0 1.0 OD2 A:ASP1239 4.7 32.7 1.0 CB A:GLN1215 4.7 25.5 1.0 CG A:ASN1191 4.7 63.4 1.0 CE2 A:TYR1056 4.9 20.1 1.0 CA A:ASN1191 4.9 46.2 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Protein Gi:16801725, Member of Enolase Superfamily From Listeria Innocua CLIP11262 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg5002 b:60.8 occ:1.00 OE1 B:GLU2214 2.4 34.4 1.0 OD1 B:ASP2239 2.5 35.9 1.0 CD B:GLU2214 3.5 31.2 1.0 OE1 B:GLU2240 3.5 29.6 1.0 CG B:ASP2239 3.6 31.6 1.0 OD1 B:ASN2191 3.7 68.3 1.0 OE2 B:GLU2240 3.8 32.0 1.0 CB B:ASP2239 3.9 30.6 1.0 CD B:GLU2240 4.0 28.5 1.0 OD1 B:ASP2189 4.0 51.8 1.0 OD2 B:ASP2189 4.1 53.6 1.0 CG B:GLU2214 4.1 30.0 1.0 OE2 B:GLU2214 4.4 34.0 1.0 CG B:ASP2189 4.5 47.6 1.0 CG B:ASN2191 4.7 60.8 1.0 OD2 B:ASP2239 4.7 28.7 1.0 CE2 B:TYR2056 4.9 18.7 1.0 CA B:ASN2191 5.0 47.0 1.0 NZ B:LYS2263 5.0 24.9 1.0

D.Odokonyero, A.Sakai, Y.Patskovsky, V.N.Malashkevich, A.A.Fedorov, J.B.Bonanno, E.V.Fedorov, R.Toro, R.Agarwal, C.Wang, N.D.Ozerova, W.S.Yew, J.M.Sauder, S.Swaminathan, S.K.Burley, S.C.Almo, M.E.Glasner. Loss of Quaternary Structure Is Associated with Rapid Sequence Divergence in the Osbs Family Proc.Natl.Acad.Sci.Usa V. 111 8535 2014.
ISSN: ISSN 0027-8424
PubMed: 24872444
DOI: 10.1073/PNAS.1318703111