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Magnesium in PDB 1xl6: Intermediate Gating Structure 2 of the Inwardly Rectifying K+ Channel KIRBAC3.1

Protein crystallography data

The structure of Intermediate Gating Structure 2 of the Inwardly Rectifying K+ Channel KIRBAC3.1, PDB code: 1xl6 was solved by J.M.Gulbis, A.Kuo, B.Smith, D.A.Doyle, A.Edwards, C.Arrowsmith, M.Sundstrom, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.85
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 105.756, 107.532, 89.654, 90.00, 90.00, 90.00
R / Rfree (%) 27 / 31

Other elements in 1xl6:

The structure of Intermediate Gating Structure 2 of the Inwardly Rectifying K+ Channel KIRBAC3.1 also contains other interesting chemical elements:

Potassium (K) 7 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Intermediate Gating Structure 2 of the Inwardly Rectifying K+ Channel KIRBAC3.1 (pdb code 1xl6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Intermediate Gating Structure 2 of the Inwardly Rectifying K+ Channel KIRBAC3.1, PDB code: 1xl6:

Magnesium binding site 1 out of 1 in 1xl6

Go back to Magnesium Binding Sites List in 1xl6
Magnesium binding site 1 out of 1 in the Intermediate Gating Structure 2 of the Inwardly Rectifying K+ Channel KIRBAC3.1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Intermediate Gating Structure 2 of the Inwardly Rectifying K+ Channel KIRBAC3.1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2001

b:57.8
occ:0.50
K A:K1003 1.1 25.2 0.5
O A:HOH2003 2.0 62.5 0.5
OG1 A:THR96 2.7 48.6 1.0
OG1 B:THR96 2.8 48.0 1.0
O A:THR96 3.6 48.8 1.0
O B:THR96 3.7 45.5 1.0
K A:K1006 3.9 16.0 0.5
CB A:THR96 3.9 48.0 1.0
CB B:THR96 4.0 45.6 1.0
O B:HOH3004 4.1 38.2 1.0
O B:HOH3011 4.1 49.0 1.0
O B:ALA95 4.3 46.5 1.0
O A:ALA95 4.4 49.0 1.0
C B:THR96 4.4 47.0 1.0
C A:THR96 4.4 49.7 1.0
K B:K1005 4.7 63.2 0.5
CA B:THR96 4.8 46.7 1.0
CA A:THR96 4.8 49.3 1.0
CG2 A:THR96 4.8 48.2 1.0
CG2 B:THR96 5.0 45.6 1.0

Reference:

J.M.Gulbis, A.Kuo, B.Smith, D.A.Doyle, A.Edwards, C.Arrowsmith, M.Sundstrom. Two Intermediate Gating State Crystal Structures of the KIRBAC3.1 K+ Channel To Be Published.
Page generated: Tue Aug 13 17:43:15 2024

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