Magnesium in PDB 1xqa: Structure of A Possible Glyoxalase From Bacillus Cereus

The structure of Structure of A Possible Glyoxalase From Bacillus Cereus, PDB code: 1xqa was solved by M.E.Cuff, H.Li, A.Joachimiak, Midwest Center For Structural Genomics(Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.45 / 1.80
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	43.535, 61.616, 78.382, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 23.6

The binding sites of Magnesium atom in the Structure of A Possible Glyoxalase From Bacillus Cereus (pdb code 1xqa). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of A Possible Glyoxalase From Bacillus Cereus, PDB code: 1xqa:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of A Possible Glyoxalase From Bacillus Cereus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Possible Glyoxalase From Bacillus Cereus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:33.6 occ:1.00 O A:HOH635 2.1 35.9 1.0 NE2 A:HIS62 2.2 21.1 1.0 O A:HOH614 2.5 49.2 1.0 OE1 A:GLU109 2.9 30.5 1.0 CD2 A:HIS62 3.1 21.4 1.0 OE2 A:GLU109 3.1 27.8 1.0 CD A:GLU109 3.2 28.1 1.0 CE1 A:HIS62 3.3 22.9 1.0 O A:HOH566 3.6 46.1 1.0 CG A:HIS62 4.3 20.4 1.0 ND1 A:HIS62 4.3 21.0 1.0 CG A:GLU109 4.4 22.6 1.0 OH A:TYR99 4.5 24.5 1.0 CB A:GLU109 4.8 20.7 1.0 O A:HOH555 4.8 42.2 1.0 CE1 A:TYR99 4.9 21.7 1.0

Magnesium binding site 2 out of 2 in the Structure of A Possible Glyoxalase From Bacillus Cereus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of A Possible Glyoxalase From Bacillus Cereus within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:33.1 occ:1.00 O B:HOH554 1.9 40.5 1.0 NE2 B:HIS62 2.2 22.2 1.0 O B:HOH473 2.4 42.4 1.0 OE1 B:GLU109 3.1 27.8 1.0 CD2 B:HIS62 3.2 21.3 1.0 CE1 B:HIS62 3.2 21.8 1.0 OE2 B:GLU109 3.2 27.2 1.0 CD B:GLU109 3.3 28.0 1.0 O B:HOH470 3.9 42.1 1.0 O B:HOH538 4.0 60.2 1.0 O B:HOH543 4.0 48.4 1.0 ND1 B:HIS62 4.3 22.4 1.0 CG B:HIS62 4.3 21.1 1.0 OH B:TYR99 4.4 23.3 1.0 CG B:GLU109 4.5 21.1 1.0 CE1 B:TYR99 4.9 22.0 1.0 CB B:GLU109 4.9 18.7 1.0

M.E.Cuff, H.Li, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg). Structure of A Possible Glyoxalase From Bacillus Cereus To Be Published.