Atomistry » Magnesium » PDB 1ydf-1yqt » 1yio
Atomistry »
  Magnesium »
    PDB 1ydf-1yqt »
      1yio »

Magnesium in PDB 1yio: Crystallographic Structure of Response Regulator Styr From Pseudomonas Fluorescens

Protein crystallography data

The structure of Crystallographic Structure of Response Regulator Styr From Pseudomonas Fluorescens, PDB code: 1yio was solved by M.Milani, L.Leoni, G.Rampioni, E.Zennaro, P.Ascenzi, M.Bolognesi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.196, 35.679, 73.877, 90.00, 99.15, 90.00
R / Rfree (%) 20.1 / 27.5

Other elements in 1yio:

The structure of Crystallographic Structure of Response Regulator Styr From Pseudomonas Fluorescens also contains other interesting chemical elements:

Mercury (Hg) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystallographic Structure of Response Regulator Styr From Pseudomonas Fluorescens (pdb code 1yio). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystallographic Structure of Response Regulator Styr From Pseudomonas Fluorescens, PDB code: 1yio:

Magnesium binding site 1 out of 1 in 1yio

Go back to Magnesium Binding Sites List in 1yio
Magnesium binding site 1 out of 1 in the Crystallographic Structure of Response Regulator Styr From Pseudomonas Fluorescens


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystallographic Structure of Response Regulator Styr From Pseudomonas Fluorescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg212

b:27.4
occ:1.00
O A:HOH218 2.0 21.7 1.0
OD2 A:ASP55 2.0 23.7 1.0
O A:ARG57 2.1 21.7 1.0
O A:HOH219 2.1 18.9 1.0
O A:HOH217 2.2 14.5 1.0
OD2 A:ASP12 2.2 20.6 1.0
CG A:ASP12 3.1 21.2 1.0
CG A:ASP55 3.1 20.5 1.0
OD1 A:ASP12 3.2 22.1 1.0
C A:ARG57 3.4 17.0 1.0
OD1 A:ASP55 3.5 18.3 1.0
OD1 A:ASP11 3.9 18.8 1.0
NZ A:LYS105 4.1 20.9 1.0
N A:MET58 4.3 16.8 1.0
CG A:MET58 4.3 21.2 1.0
CA A:ARG57 4.3 21.8 1.0
CA A:MET58 4.3 18.5 1.0
CB A:ASP55 4.4 16.5 1.0
CB A:ARG57 4.4 25.8 1.0
N A:ASP12 4.5 15.5 1.0
N A:ARG57 4.5 21.9 1.0
CB A:ASP12 4.5 18.9 1.0
O A:HOH284 4.6 47.0 1.0
CG A:ASP11 4.6 16.9 1.0
O A:HOH281 4.7 31.2 1.0
CB A:MET58 4.8 19.9 1.0
OD2 A:ASP11 4.9 20.7 1.0

Reference:

M.Milani, L.Leoni, G.Rampioni, E.Zennaro, P.Ascenzi, M.Bolognesi. An Active-Like Structure in the Unphosphorylated Styr Response Regulator Suggests A Phosphorylation- Dependent Allosteric Activation Mechanism Structure V. 13 1289 2005.
ISSN: ISSN 0969-2126
PubMed: 16154086
DOI: 10.1016/J.STR.2005.05.014
Page generated: Mon Dec 14 07:07:51 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy