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Magnesium in PDB 1ymv: Signal Transduction Protein Chey Mutant with Phe 14 Replaced By Gly, Ser 15 Replaced By Gly, and Met 17 Replaced By Gly

Protein crystallography data

The structure of Signal Transduction Protein Chey Mutant with Phe 14 Replaced By Gly, Ser 15 Replaced By Gly, and Met 17 Replaced By Gly, PDB code: 1ymv was solved by L.Bellsolell, M.Coll, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.100, 53.900, 57.500, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / n/a

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Signal Transduction Protein Chey Mutant with Phe 14 Replaced By Gly, Ser 15 Replaced By Gly, and Met 17 Replaced By Gly (pdb code 1ymv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Signal Transduction Protein Chey Mutant with Phe 14 Replaced By Gly, Ser 15 Replaced By Gly, and Met 17 Replaced By Gly, PDB code: 1ymv:

Magnesium binding site 1 out of 1 in 1ymv

Go back to Magnesium Binding Sites List in 1ymv
Magnesium binding site 1 out of 1 in the Signal Transduction Protein Chey Mutant with Phe 14 Replaced By Gly, Ser 15 Replaced By Gly, and Met 17 Replaced By Gly


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Signal Transduction Protein Chey Mutant with Phe 14 Replaced By Gly, Ser 15 Replaced By Gly, and Met 17 Replaced By Gly within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg200

b:17.4
occ:1.00
OD2 A:ASP57 2.0 14.8 1.0
O A:HOH301 2.0 21.1 1.0
O A:HOH303 2.1 16.3 1.0
O A:HOH302 2.1 18.5 1.0
OD1 A:ASP13 2.1 16.1 1.0
O A:ASN59 2.1 14.6 1.0
CG A:ASP57 3.0 13.0 1.0
CG A:ASP13 3.2 11.9 1.0
C A:ASN59 3.3 15.2 1.0
OD1 A:ASP57 3.4 15.2 1.0
OD2 A:ASP13 3.5 15.1 1.0
OD1 A:ASP12 3.9 15.9 1.0
CA A:ASN59 4.1 16.2 1.0
CB A:ASN59 4.2 19.8 1.0
N A:ASN59 4.2 13.1 1.0
CG A:MET60 4.3 10.5 1.0
CB A:ASP57 4.4 10.1 1.0
N A:MET60 4.4 15.2 1.0
O A:HOH284 4.4 48.2 1.0
N A:ASP13 4.5 10.2 1.0
CB A:ASP13 4.5 10.9 1.0
CA A:MET60 4.6 14.0 1.0
CG A:ASP12 4.9 11.6 1.0
CA A:ASP13 5.0 12.1 1.0
NZ A:LYS109 5.0 26.4 0.0

Reference:

L.Bellsolell, P.Cronet, M.Majolero, L.Serrano, M.Coll. The Three-Dimensional Structure of Two Mutants of the Signal Transduction Protein Chey Suggest Its Molecular Activation Mechanism. J.Mol.Biol. V. 257 116 1996.
ISSN: ISSN 0022-2836
PubMed: 8632450
DOI: 10.1006/JMBI.1996.0151
Page generated: Mon Dec 14 07:10:01 2020

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