Magnesium in PDB 1yvn: The Yeast Actin Val 159 Asn Mutant Complex with Human Gelsolin Segment 1.

The structure of The Yeast Actin Val 159 Asn Mutant Complex with Human Gelsolin Segment 1., PDB code: 1yvn was solved by S.M.Vorobiev, L.D.Belmont, D.G.Drubin, S.C.Almo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.00 / 2.10
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	176.098, 68.077, 54.691, 90.00, 102.24, 90.00
R / Rfree (%)	18.7 / 23.5

The structure of The Yeast Actin Val 159 Asn Mutant Complex with Human Gelsolin Segment 1. also contains other interesting chemical elements:

Calcium

(Ca)

1 atom

The binding sites of Magnesium atom in the The Yeast Actin Val 159 Asn Mutant Complex with Human Gelsolin Segment 1. (pdb code 1yvn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Yeast Actin Val 159 Asn Mutant Complex with Human Gelsolin Segment 1., PDB code: 1yvn:

Magnesium binding site 1 out of 1 in the The Yeast Actin Val 159 Asn Mutant Complex with Human Gelsolin Segment 1.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Yeast Actin Val 159 Asn Mutant Complex with Human Gelsolin Segment 1. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg376 b:15.0 occ:1.00 O A:HOH428 2.2 8.9 1.0 O A:HOH413 2.2 21.1 1.0 O A:HOH380 2.3 9.1 1.0 O1G A:ATP378 2.3 9.3 1.0 O A:HOH478 2.3 15.8 1.0 O1B A:ATP378 2.3 11.4 1.0 PB A:ATP378 3.3 14.9 1.0 PG A:ATP378 3.5 15.3 1.0 O3B A:ATP378 3.6 13.3 1.0 O2G A:ATP378 3.9 13.7 1.0 O3A A:ATP378 3.9 18.3 1.0 O A:HOH438 4.0 13.8 1.0 O A:HOH436 4.0 17.1 1.0 O1A A:ATP378 4.1 11.9 1.0 OE1 A:GLN137 4.1 7.7 1.0 O A:HOH390 4.3 14.8 1.0 OD1 A:ASP154 4.3 19.5 1.0 OD2 A:ASP11 4.3 8.6 1.0 CA A:GLY13 4.3 11.3 1.0 NZ A:LYS18 4.4 6.7 1.0 OD1 A:ASP11 4.4 10.3 1.0 PA A:ATP378 4.5 14.4 1.0 O2B A:ATP378 4.5 11.0 1.0 CD A:GLN137 4.6 4.9 1.0 O A:HOH401 4.7 19.6 1.0 O3G A:ATP378 4.8 21.9 1.0 CG A:ASP11 4.8 18.6 1.0 OD2 A:ASP154 4.8 26.3 1.0 O2A A:ATP378 4.9 12.6 1.0 CG A:ASP154 5.0 24.7 1.0

S.M.Vorobiev, L.D.Belmont, D.D.Drubin, C.Almos. Crystal Structure of Yeast Actin V159N Mutant To Be Published.